Logo
Information on SUBCLASS 18.4.1
Subclass Accession number: 4327
Subclass: 18.4.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 50964 (>75 %)  50985 (>75 %)  69315 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 59.5 +/- -6.3
Average RMSD (Å) : 0.267 +/- 0.058

Consensus geometry
d (Å): 19 delta (°): 135-180 theta (°): 0-45 rho (°): 90-135
Consensus Sequence: WGXNXpcQXThPXXXXSGVpAI
(φψ)-conformation: bepaaalaapppaaaablpabb
Pattern: [EK][V][IL][AG][W][G][ADG][N]x[DNY][GK][Q][LT][T][MV][P][AT][AE][AT]x[S][G][V][DS][A][I][A][AS]
Conservation:-0.2230.187-0.252-0.5263.3201.082-1.1071.082-1.405-1.057-0.7350.634-0.7640.634-0.3891.529-0.606-0.764-0.608-1.2060.1871.0820.187-0.3770.1870.1870.187-0.466
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jtd_B_1221jtd   B122149EVIAWGGNEDGQTTVPAEARSGVDAIAAEEEEEE--TTSTT---GGGGSS--EEEEbxbbbexaaavaaxxxaaaabvxabbbb
1jtd_B_2391jtd   B239266KVIAWGDNRYKQTTVPTEALSGVSAIASEEEEEE--TTSTT---GGGGSS--EEEEbxbbbexaaavaaxxwaaaabvxabbbb
1jtd_B_831jtd   B83110KVLGWGANLNGQLTMPAATQSGVDAIAAEEEEEE--TTSTTS--GGGGS---EEEEbxbbbexaaavaaxpxaaaabvxabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jtd_B_831jtd   B     CACALCIUM ION G - 104
1jtd_B_831jtd   B     CACALCIUM ION V - 105
1jtd_B_831jtd   B     CACALCIUM ION D - 106
1jtd_B_1221jtd   B     CACALCIUM ION D - 131
1jtd_B_1221jtd   B     CACALCIUM ION D - 145
1jtd_B_1221jtd   B     CACALCIUM ION A - 146
1jtd_B_1221jtd   B     CACALCIUM ION A - 148
1jtd_B_1221jtd   B     CACALCIUM ION A - 149
1jtd_B_2391jtd   B     CACALCIUM ION S - 266

Clusters included in this Subclass
CLUSTER: AR.17.8