Information on SUBCLASS 2.1.8 |
Subclass Accession number: 6649
Subclass: 2.1.8 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 12.9 +/- 16.4 Average RMSD (Å) : 0.620 +/- 0.084 Consensus geometry
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Consensus Sequence: | hXXXXh |
(φψ)-conformation: | bbpabb |
Pattern: | [FIV] | [apvy] | [LMTV] | x | [GSV] | [DGTV] | [AFIV] |
Conservation: | 1.763 | -1.163 | 0.560 | -0.691 | -0.358 | -0.609 | 0.498 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fc4_A_176 | 1fc4 | A | 178 | 184 | IATDGVF | EE-BSEE | bbbxabx |
1kht_A_87 | 1kht | A | 89 | 95 | VDTHSTV | EE--SEE | xxbbabb |
1odz_A_315 | 1odz | A | 315 | 321 | IPVISGI | EE-B-EE | bxbbabb |
1php_*_259 | 1php | - | 260 | 266 | FYMPVDV | EE--SEE | bbbpabb |
1vpe_*_259 | 1vpe | - | 260 | 266 | IVLPVDA | EE--SEE | bxbxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fc4_A_176 | 1fc4 | A | MSESELENOMETHIONINE | V - 176 |
1fc4_A_176 | 1fc4 | A | MSESELENOMETHIONINE | L - 177 |
1fc4_A_176 | 1fc4 | A | MSESELENOMETHIONINE | I - 178 |
1fc4_A_176 | 1fc4 | A | MSESELENOMETHIONINE | A - 179 |
1fc4_A_176 | 1fc4 | A | MSESELENOMETHIONINE | T - 180 |
1fc4_A_176 | 1fc4 | A | MSESELENOMETHIONINE | D - 181 |
1fc4_A_176 | 1fc4 | A | PLPPYRIDOXAL-5'-PHOSPHATE | D - 181 |
1fc4_A_176 | 1fc4 | A | PLPPYRIDOXAL-5'-PHOSPHATE | G - 182 |
1fc4_A_176 | 1fc4 | A | PLPPYRIDOXAL-5'-PHOSPHATE | V - 183 |
1fc4_A_176 | 1fc4 | A | MSESELENOMETHIONINE | F - 184 |
1odz_A_315 | 1odz | A | MANALPHA-D-MANNOSE | G - 320 |
1odz_A_315 | 1odz | A | MANALPHA-D-MANNOSE | I - 321 |
Clusters included in this Subclass |
CLUSTER: AR.2.51 |