Information on SUBCLASS 10.13.1 |
Subclass Accession number: 3562
Subclass: 10.13.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.4 (>75 %) 2.4.2 (>75 %) 2.4.2.1 GO : GO:0004731 (>75 %) GO:0016757 (>75 %) GO:0016763 (>75 %) SCOP : 53162 (>75 %) 53167 (>75 %) 53168 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 55.6 +/- 6.8 Average RMSD (Å) : 0.367 +/- 0.058 Consensus geometry
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Consensus Sequence: | hXGRhHhYEGpXhX |
(φψ)-conformation: | bpebbbaaagppaa |
Pattern: | [HR] | [AR] | [CV] | [LV] | [MV] | [LM] | [AQ] | [G] | [R] | [FI] | [H] | [AM] | [Y] | [E] | [G] | [HY] | [DP] | [FL] | [RW] | [KY] | [V] |
Conservation: | -0.266 | -1.070 | -0.486 | -0.655 | -0.513 | -0.241 | -1.057 | 1.249 | 0.705 | -0.642 | 2.337 | -1.057 | 1.793 | 0.705 | 1.249 | 0.563 | -0.512 | -0.708 | -0.615 | -0.940 | 0.160 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b8o_A_76 | 1b8o | A | 76 | 96 | RACVMMQGRFHMYEGYPFWKV | EEEEEEES---GGGT--HHHH | bxbbbxxebbbaaagxxaaaa |
1g2o_A_80 | 1g2o | A | 80 | 100 | HRVLVLAGRIHAYEGHDLRYV | EEEEEEE----GGGT--HHHH | bbbxbxxebbbaaavxpaaaa |
1m73_E_76 | 1m73 | E | 76 | 96 | RACVMMQGRFHMYEGYPLWKV | EEEEEEES---GGGT--HHHH | bxbbbbxvxxbaaagxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b8o_A_76 | 1b8o | A | PO4PHOSPHATE ION | R - 84 |
1b8o_A_76 | 1b8o | A | PO4PHOSPHATE ION | H - 86 |
1b8o_A_76 | 1b8o | A | IMH1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL | H - 86 |
1b8o_A_76 | 1b8o | A | PO4PHOSPHATE ION | Y - 88 |
1b8o_A_76 | 1b8o | A | IMH1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL | Y - 88 |
1g2o_A_80 | 1g2o | A | PO4PHOSPHATE ION | R - 88 |
1g2o_A_80 | 1g2o | A | PO4PHOSPHATE ION | H - 90 |
1g2o_A_80 | 1g2o | A | IMH1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL | H - 90 |
1g2o_A_80 | 1g2o | A | PO4PHOSPHATE ION | Y - 92 |
1g2o_A_80 | 1g2o | A | IMH1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL | Y - 92 |
Clusters included in this Subclass |
CLUSTER: EH.9.45 |