Information on SUBCLASS 11.13.1 |
Subclass Accession number: 7672
Subclass: 11.13.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 42.0 +/- 11.8 Average RMSD (Å) : 0.333 +/- 0.058 Consensus geometry
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Consensus Sequence: | hhXSchphGpXPDXR |
(φψ)-conformation: | bbapaaaplppppaa |
Pattern: | [NW] | x | [IV] | [D] | [S] | [AFG] | [AG] | [TV] | [S] | [DGN] | [WY] | [EHN] | [IV] | [G] | [ENR] | [PS] | [P] | [D] | x | [R] | [AGT] | x | [S] | [CI] | [CLM] | [KR] | [NQR] |
Conservation: | -0.031 | -1.355 | 0.163 | 1.588 | 0.436 | -1.483 | -0.483 | -0.431 | 0.436 | -0.715 | 1.141 | -0.523 | 0.163 | 1.588 | -0.843 | -0.671 | 2.164 | 1.588 | -0.843 | 1.012 | -1.163 | -1.117 | 0.436 | 0.177 | -0.715 | 0.197 | -0.715 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d1q_A_40 | 1d1q | A | 41 | 67 | NKIDSFGTSNYHVGESPDHRTVSICKQ | EEEEEEESS-TTBT----HHHHHHHHH | abbbbbbaxaaapvxxxpaaaaaaaaa |
1dg9_A_39 | 1dg9 | A | 39 | 65 | WVIDSGAVSDWNVGRSPDPRAVSCLRN | EEEEEEES-STTTT----HHHHHHHHH | bbbbbbbaxaaapvxxxpaaaaaaaaa |
5pnt_*_39 | 5pnt | - | 39 | 65 | WRVDSAATSGYEIGNPPDYRGQSCMKR | EEEEEEESSSTTTT----HHHHHHHHH | bbbbbbbabaaapvxxppaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d1q_A_40 | 1d1q | A | 4NP4-NITROPHENYL PHOSPHATE | F - 46 |
1d1q_A_40 | 1d1q | A | 4NP4-NITROPHENYL PHOSPHATE | H - 52 |
1dg9_A_39 | 1dg9 | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | W - 49 |
1dg9_A_39 | 1dg9 | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | N - 50 |
5pnt_*_39 | 5pnt | * | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | Y - 49 |
5pnt_*_39 | 5pnt | * | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | E - 50 |
Clusters included in this Subclass |
CLUSTER: EH.10.19 |