Information on SUBCLASS 29.1.1 |
Subclass Accession number: 7724
Subclass: 29.1.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 57.2 +/- 17.2 Average RMSD (Å) : 0.425 +/- 0.050 Consensus geometry
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Consensus Sequence: | pFXpXhhHPNVpXXGpICLDILpppWphXhphX |
(φψ)-conformation: | bpappbbbaabpaagpbpbaaaaaapbaapbaa |
Pattern: | [KTV] | [V] | [KR] | [F] | [IMTV] | [ST] | [KPR] | [CIM] | [FWY] | [H] | [P] | [N] | [IV] | [DY] | [AKQ] | x | [G] | [NRS] | [I] | [C] | [L] | [D] | [I] | [L] | [KQ] | [DEN] | [KNQR] | [W] | [ST] | [AP] | x | [LY] | [DQ] | [IV] | [AR] | [AT] | [IV] | [L] | [LT] | [S] | [IL] | [Q] | [AS] | [L] |
Conservation: | -1.219 | 0.176 | -0.051 | 1.086 | -0.962 | -0.351 | -0.815 | -0.837 | 0.152 | 1.996 | 1.541 | 1.086 | -0.031 | -0.842 | -1.061 | -1.521 | 1.086 | -0.897 | 0.176 | 2.451 | 0.176 | 1.086 | 0.176 | 0.176 | -0.265 | -0.487 | -0.820 | 3.361 | -0.401 | -0.368 | -1.275 | -0.378 | -0.270 | -0.039 | -0.799 | -0.575 | -0.039 | 0.176 | -0.857 | 0.176 | -0.253 | 0.631 | -0.469 | 0.176 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1j7d_B_68 | 1j7d | B | 68 | 111 | KVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQAL | EEEE-S---BTTB-TT-BB--GGGTTS--TTS-HHHHHHHHHHH | bbbxabxbxbaabxaavxbbbaaaaaaxbaaaeaaaaaaaaaaa |
1q34_A_69 | 1q34 | A | 69 | 112 | TVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSL | EEEESS----TTB-TTSBB--GGGTTT--TT--HHHHHHHHHHH | bbbxapxbbbaabxaavxxxbaaaFaaxbaaxbaaaaaaaaaaa |
2aak_*_69 | 2aak | - | 69 | 112 | TVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSL | EEEESS----TTB-TTSBB--GGGTTS--TT--HHHHHHHHHHH | xbbxaxxbbbaabxaagxbxbaaaaaaxbaapbaaaaaaaaaaa |
2e2c_*_95 | 2e2c | - | 95 | 138 | VVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSL | EEEESS---BTTB-TT-BB--GGGTTT--TT--HHHHHHHHHHH | xbbxaxpbxbaabxaavxbbbaaaFaaxbaaxbaaaaaaaaaaa |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
2aak_*_69 | 2aak | * | C88CYS 88 BINDS A UBIQUITIN MOLECULE THROUGH A THIOLESTER BOND WITH THE C TERMINUS OF UBIQUITIN. | C - 88 |
Clusters included in this Subclass |
CLUSTER: EH.28.0 |