Information on SUBCLASS 4.12.5 |
Subclass Accession number: 1269
Subclass: 4.12.5 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 14.8 +/- 15.1 Average RMSD (Å) : 1.033 +/- 0.153 Consensus geometry
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Consensus Sequence: | YhXXXcXX |
(φψ)-conformation: | bbppapaa |
Pattern: | [FIV] | [Y] | [IP] | [LTV] | x | x | [DKN] | [NPT] | x | x | x | [EQS] | [AT] | [IV] | [FV] | [EKP] | [LVY] | [AFL] |
Conservation: | 0.045 | 3.477 | 0.073 | -0.336 | -0.641 | -0.641 | -0.031 | -0.412 | -0.794 | -0.382 | -0.946 | 0.045 | 0.255 | 1.107 | 0.417 | -0.183 | -0.336 | -0.717 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hsk_A_48 | 1hsk | A | 51 | 68 | FYITPTKNEEVQAVVKYA | EEE--SSHHHHHHHHHHH | bbbbxabaaaaaaaaaaa |
1sx5_A_30 | 1sx5 | A | 30 | 47 | IYPLGSDTAVLSTIFELF | EEE--SSHHHHHHHHHHH | bbxxxaxaaaaaaaaaaa |
1v4v_A_232 | 1v4v | A | 234 | 251 | VYPVHLNPVVREAVFPVL | EEE--S-HHHHHHHHHHH | bbxxpapaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1sx5_A_30 | 1sx5 | A | MNMANGANESE (II) ION | D - 36 |
1sx5_A_30 | 1sx5 | A | MNMANGANESE (II) ION | E - 45 |
1v4v_A_232 | 1v4v | A | MSESELENOMETHIONINE | Y - 235 |
1v4v_A_232 | 1v4v | A | MSESELENOMETHIONINE | P - 236 |
1v4v_A_232 | 1v4v | A | MSESELENOMETHIONINE | V - 237 |
1v4v_A_232 | 1v4v | A | MSESELENOMETHIONINE | H - 238 |
1v4v_A_232 | 1v4v | A | MSESELENOMETHIONINE | V - 243 |
1v4v_A_232 | 1v4v | A | MSESELENOMETHIONINE | V - 247 |
1v4v_A_232 | 1v4v | A | MSESELENOMETHIONINE | L - 251 |
Clusters included in this Subclass |
CLUSTER: EH.5.217 |