Information on SUBCLASS 5.16.2 |
Subclass Accession number: 3246
Subclass: 5.16.2 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 70.6 +/- 14.5 Average RMSD (Å) : 0.380 +/- 0.130 Consensus geometry
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Consensus Sequence: | hWHpQXPXW |
(φψ)-conformation: | bbaplbpaa |
Pattern: | x | [IMV] | [R] | [G] | [H] | [T] | [L] | [AIV] | [W] | [H] | [NS] | [Q] | x | [P] | [GS] | [W] | [LMV] | x |
Conservation: | -1.025 | -0.652 | 0.093 | 0.400 | 1.012 | 0.093 | -0.213 | -0.881 | 1.931 | 1.012 | -0.555 | 0.093 | -1.286 | 0.706 | -0.684 | 1.931 | -0.730 | -1.245 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bg4_*_80 | 1bg4 | - | 80 | 97 | LIRGHTLVWHSQLPGWVS | EEEEEEEE-SSS--HHHH | xbbxbwabbaxlbwaaaa |
1i1w_A_79 | 1i1w | A | 79 | 96 | LIRGHTLVWHSQLPSWVS | EEEEEEEE-STT--HHHH | xbbxbwabbaxlbpaaaa |
1od8_A_77 | 1od8 | A | 77 | 94 | QVRGHTLAWHSQQPGWMQ | EEEEEEEE-SSS--HHHH | xbxxbwabbablxxaaaa |
1tux_*_79 | 1tux | - | 79 | 96 | LIRGHTLVWHSQLPSWVV | EEEEEEEE-SSS--HHHH | xbbxbMabbaxlbxaaaa |
1xyz_A_592 | 1xyz | A | 592 | 609 | QMRGHTLIWHNQNPSWLT | EEEEEEEE-SSS--HHHH | xbbxbwabbablbxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bg4_*_80 | 1bg4 | * | GOLGLYCEROL | H - 84 |
1bg4_*_80 | 1bg4 | * | GOLGLYCEROL | T - 85 |
1bg4_*_80 | 1bg4 | * | GOLGLYCEROL | W - 88 |
1bg4_*_80 | 1bg4 | * | GOLGLYCEROL | Q - 91 |
1i1w_A_79 | 1i1w | A | GOLGLYCEROL | H - 83 |
1i1w_A_79 | 1i1w | A | GOLGLYCEROL | T - 84 |
1i1w_A_79 | 1i1w | A | GOLGLYCEROL | W - 87 |
1i1w_A_79 | 1i1w | A | GOLGLYCEROL | S - 89 |
1i1w_A_79 | 1i1w | A | GOLGLYCEROL | Q - 90 |
1od8_A_77 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | H - 81 |
1od8_A_77 | 1od8 | A | XYPBETA-D-XYLOPYRANOSE | H - 81 |
1od8_A_77 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | T - 82 |
1od8_A_77 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | W - 85 |
1od8_A_77 | 1od8 | A | XYPBETA-D-XYLOPYRANOSE | W - 85 |
1od8_A_77 | 1od8 | A | IMDIMIDAZOLE | W - 85 |
1od8_A_77 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | Q - 88 |
1od8_A_77 | 1od8 | A | XYPBETA-D-XYLOPYRANOSE | Q - 88 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1od8_A_77 | 1od8 | A | AC9XDL BINDING SITE FOR CHAIN A | H - 81 |
1od8_A_77 | 1od8 | A | AC9XDL BINDING SITE FOR CHAIN A | W - 85 |
Clusters included in this Subclass |
CLUSTER: EH.5.156 |