Logo
Information on SUBCLASS 5.23.1
Subclass Accession number: 1417
Subclass: 5.23.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0046914 (>75 %)  
SCOP : 53821 (>75 %)  53822 (>75 %)  53823 (>75 %)  
Number of loops: 2

Average sequence ID (%) : 19.2 +/- 0.0
Average RMSD (Å) : 0.600 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XhppppXXh
(φψ)-conformation: bbabaapaa
Pattern: [RS][I][G][LV][LT][AI][TY][KS][SY][DE][AD][AN][FY][FM][AS]x[IV]x[EK][A][IV][E][K][DN][CG][FK]
Conservation:-0.7720.8552.301-0.229-0.772-0.952-0.591-0.410-0.7720.674-0.952-0.9521.397-0.049-0.229-1.1330.494-1.4950.1320.8550.4941.5781.5780.494-0.410-1.133
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dbq_A_611dbq   A6186SIGLLATSSEAAYFAEIIEAVEKNCFEEEEEES-TTSHHHHHHHHHHHHHHHbbbbbbabaaxaaaaaaaaaaaaaaa
1gca_*_31gca   -429RIGVTIYKYDDNFMSVVRKAIEKDGKEEEEEES-TT-HHHHHHHHHHHHHHHxbxbbbabaaxaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dbq_A_611dbq   A     MGMAGNESIUM ION S - 69
1dbq_A_611dbq   A     MGMAGNESIUM ION E - 70
1dbq_A_611dbq   A     MGMAGNESIUM ION I - 78
1dbq_A_611dbq   A     MGMAGNESIUM ION E - 79
1dbq_A_611dbq   A     MGMAGNESIUM ION E - 82
1gca_*_31gca   *     GALD-GALACTOSE Y - 10
1gca_*_31gca   *     CACALCIUM ION Y - 10
1gca_*_31gca   *     GALD-GALACTOSE D - 14
1gca_*_31gca   *     CACALCIUM ION D - 14
1gca_*_31gca   *     GALD-GALACTOSE N - 15
1gca_*_31gca   *     CACALCIUM ION N - 15
1gca_*_31gca   *     GALD-GALACTOSE F - 16
1gca_*_31gca   *     CACALCIUM ION F - 16
1gca_*_31gca   *     GALD-GALACTOSE M - 17
1gca_*_31gca   *     CACALCIUM ION M - 17
1gca_*_31gca   *     GALD-GALACTOSE S - 18
1gca_*_31gca   *     CACALCIUM ION S - 18

Clusters included in this Subclass
CLUSTER: EH.6.176