Information on SUBCLASS 5.23.1 |
Subclass Accession number: 1417
Subclass: 5.23.1 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0046914 (>75 %) SCOP : 53821 (>75 %) 53822 (>75 %) 53823 (>75 %) |
Number of loops: 2 Average sequence ID (%) : 19.2 +/- 0.0 Average RMSD (Å) : 0.600 +/- 0.000 Consensus geometry
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Consensus Sequence: | XhppppXXh |
(φψ)-conformation: | bbabaapaa |
Pattern: | [RS] | [I] | [G] | [LV] | [LT] | [AI] | [TY] | [KS] | [SY] | [DE] | [AD] | [AN] | [FY] | [FM] | [AS] | x | [IV] | x | [EK] | [A] | [IV] | [E] | [K] | [DN] | [CG] | [FK] |
Conservation: | -0.772 | 0.855 | 2.301 | -0.229 | -0.772 | -0.952 | -0.591 | -0.410 | -0.772 | 0.674 | -0.952 | -0.952 | 1.397 | -0.049 | -0.229 | -1.133 | 0.494 | -1.495 | 0.132 | 0.855 | 0.494 | 1.578 | 1.578 | 0.494 | -0.410 | -1.133 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dbq_A_61 | 1dbq | A | 61 | 86 | SIGLLATSSEAAYFAEIIEAVEKNCF | EEEEEES-TTSHHHHHHHHHHHHHHH | bbbbbbabaaxaaaaaaaaaaaaaaa |
1gca_*_3 | 1gca | - | 4 | 29 | RIGVTIYKYDDNFMSVVRKAIEKDGK | EEEEEES-TT-HHHHHHHHHHHHHHH | xbxbbbabaaxaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dbq_A_61 | 1dbq | A | MGMAGNESIUM ION | S - 69 |
1dbq_A_61 | 1dbq | A | MGMAGNESIUM ION | E - 70 |
1dbq_A_61 | 1dbq | A | MGMAGNESIUM ION | I - 78 |
1dbq_A_61 | 1dbq | A | MGMAGNESIUM ION | E - 79 |
1dbq_A_61 | 1dbq | A | MGMAGNESIUM ION | E - 82 |
1gca_*_3 | 1gca | * | GALD-GALACTOSE | Y - 10 |
1gca_*_3 | 1gca | * | CACALCIUM ION | Y - 10 |
1gca_*_3 | 1gca | * | GALD-GALACTOSE | D - 14 |
1gca_*_3 | 1gca | * | CACALCIUM ION | D - 14 |
1gca_*_3 | 1gca | * | GALD-GALACTOSE | N - 15 |
1gca_*_3 | 1gca | * | CACALCIUM ION | N - 15 |
1gca_*_3 | 1gca | * | GALD-GALACTOSE | F - 16 |
1gca_*_3 | 1gca | * | CACALCIUM ION | F - 16 |
1gca_*_3 | 1gca | * | GALD-GALACTOSE | M - 17 |
1gca_*_3 | 1gca | * | CACALCIUM ION | M - 17 |
1gca_*_3 | 1gca | * | GALD-GALACTOSE | S - 18 |
1gca_*_3 | 1gca | * | CACALCIUM ION | S - 18 |
Clusters included in this Subclass |
CLUSTER: EH.6.176 |