Information on SUBCLASS 2.2.34 |
Subclass Accession number: 7768
Subclass: 2.2.34 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 40.7 +/- 0.0 Average RMSD (Å) : 0.300 +/- 0.000 Consensus geometry
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Consensus Sequence: | NYhpGh |
(φψ)-conformation: | bpaaep |
Pattern: | [GK] | [VY] | [QT] | [CS] | [G] | [T] | [IV] | [T] | [A] | [KV] | [N] | [V] | [T] | [AV] | [N] | [Y] | [AG] | [DE] | [G] | [AP] | [V] | [RY] | [GN] | [LM] | [TV] | [QR] | [ST] |
Conservation: | -1.181 | -0.868 | -1.024 | -0.556 | 1.476 | 0.851 | -0.087 | 0.851 | 0.226 | -1.493 | 1.476 | 0.226 | 0.851 | -1.024 | 1.476 | 2.101 | -0.712 | 0.069 | 1.476 | -0.868 | 0.226 | -1.024 | -0.399 | -0.243 | -0.868 | -0.399 | -0.556 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hpg_A_156 | 1hpg | A | 156 | 182 | KVTSGTVTAVNVTVNYGDGPVYNMVRT | EEEEEEEEEEEEEEEETTEEEEEEEEE | exbbbbxabbvxxbxxaaexbblxbxb |
1qq4_A_108 | 1qq4 | A | 108 | 134 | GYQCGTITAKNVTANYAEGAVRGLTQS | EEEEEEEEEEEEEEEETTEEEEEEEEE | ebbbbxbabblxbbbxaaexbbvxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qq4_A_108 | 1qq4 | A | GOLGLYCEROL | G - 108 |
1qq4_A_108 | 1qq4 | A | GOLGLYCEROL | Y - 109 |
1qq4_A_108 | 1qq4 | A | GOLGLYCEROL | Q - 110 |
1qq4_A_108 | 1qq4 | A | GOLGLYCEROL | Y - 123 |
1qq4_A_108 | 1qq4 | A | GOLGLYCEROL | A - 124 |
1qq4_A_108 | 1qq4 | A | GOLGLYCEROL | E - 125 |
Clusters included in this Subclass |
CLUSTER: HA.3.160 |