Information on SUBCLASS 2.2.45 |
Subclass Accession number: 515
Subclass: 2.2.45 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0008289 (>75 %) SCOP : 50412 (>50 %) 50813 (>75 %) 50814 (>75 %) 50847 (>75 %) 63380 (>50 %) 63381 (>50 %) |
Number of loops: 2 Average sequence ID (%) : 35.3 +/- 0.0 Average RMSD (Å) : 0.500 +/- 0.000 Consensus geometry
|
Consensus Sequence: | XSTFpN |
(φψ)-conformation: | bbaabb |
Pattern: | [HI] | [LM] | [IT] | [IL] | [KR] | [T] | [HL] | [S] | [T] | [F] | [KR] | [N] | [TY] | x | [IM] | [DS] | [F] |
Conservation: | -1.126 | -0.095 | -0.979 | -0.243 | 0.052 | 0.935 | -1.126 | 0.346 | 0.935 | 1.525 | 0.052 | 1.525 | -0.832 | -1.568 | -0.390 | -0.537 | 1.525 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1crb_*_48 | 1crb | - | 48 | 64 | HMIIRTLSTFRNYIMDF | EEEEEEE-SS--EEEEE | xbbbbxbbaabbbbbbb |
1hms_*_48 | 1hms | - | 48 | 64 | ILTLKTHSTFKNTEISF | EEEEEEE-SS--EEEEE | bxbbbbbbaabbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1crb_*_48 | 1crb | * | RTLRETINOL | I - 51 |
1crb_*_48 | 1crb | * | RTLRETINOL | T - 53 |
1crb_*_48 | 1crb | * | RTLRETINOL | S - 55 |
1crb_*_48 | 1crb | * | RTLRETINOL | F - 57 |
1crb_*_48 | 1crb | * | RTLRETINOL | R - 58 |
1crb_*_48 | 1crb | * | RTLRETINOL | N - 59 |
1crb_*_48 | 1crb | * | RTLRETINOL | Y - 60 |
1crb_*_48 | 1crb | * | RTLRETINOL | M - 62 |
1hms_*_48 | 1hms | * | OLAOLEIC ACID | T - 53 |
1hms_*_48 | 1hms | * | OLAOLEIC ACID | H - 54 |
1hms_*_48 | 1hms | * | OLAOLEIC ACID | S - 55 |
1hms_*_48 | 1hms | * | OLAOLEIC ACID | F - 57 |
1hms_*_48 | 1hms | * | OLAOLEIC ACID | K - 58 |
1hms_*_48 | 1hms | * | OLAOLEIC ACID | N - 59 |
1hms_*_48 | 1hms | * | OLAOLEIC ACID | T - 60 |
Clusters included in this Subclass |
CLUSTER: HA.5.175 |