Information on SUBCLASS 2.5.5 |
Subclass Accession number: 561
Subclass: 2.5.5 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.4 (>50 %) 3.4.21 (>50 %) GO : GO:0004175 (>75 %) GO:0004252 (>75 %) GO:0008233 (>75 %) GO:0008236 (>75 %) SCOP : 50493 (>75 %) 50494 (>75 %) 50514 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 5.6 +/- 10.1 Average RMSD (Å) : 0.575 +/- 0.222 Consensus geometry
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Consensus Sequence: | ppXcXp |
(φψ)-conformation: | bbplbb |
Pattern: | [DHRY] | x | x | [AGK] | x | [DKPS] |
Conservation: | 0.090 | -1.202 | -0.435 | 1.798 | -0.341 | 0.090 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aa6_*_625 | 1aa6 | - | 629 | 634 | HSRKGK | EETTEE | bbxlbb |
1aop_*_369 | 1aop | - | 369 | 374 | DYPARP | EETTEE | xbpvbx |
1pgu_A_321 | 1pgu | A | 324 | 329 | YELGHD | EETTEE | bbpvba |
1vjz_A_87 | 1vjz | A | 87 | 92 | RAPGYS | EETTEE | bbpvbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1pgu_A_321 | 1pgu | A | ZNZINC ION | H - 328 |
1pgu_A_321 | 1pgu | A | ZNZINC ION | D - 329 |
1pgu_A_321 | 1pgu | A | MSESELENOMETHIONINE | E - 330 |
1pgu_A_321 | 1pgu | A | ZNZINC ION | E - 330 |
1pgu_A_321 | 1pgu | A | MSESELENOMETHIONINE | I - 335 |
1vjz_A_87 | 1vjz | A | MSESELENOMETHIONINE | R - 87 |
1vjz_A_87 | 1vjz | A | MSESELENOMETHIONINE | A - 88 |
Clusters included in this Subclass |
CLUSTER: HA.1.53 |