Information on SUBCLASS 4.1.25 |
Subclass Accession number: 6260
Subclass: 4.1.25 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 18.2 +/- 16.6 Average RMSD (Å) : 0.400 +/- 0.100 Consensus geometry
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Consensus Sequence: | XpXXppph |
(φψ)-conformation: | bbaaalbb |
Pattern: | x | [CL] | x | [DHN] | [LT] | [CK] | [KT] | [KNQ] | [KT] | [AVW] | [LV] |
Conservation: | -1.529 | 0.736 | -1.670 | 0.861 | 0.106 | 0.142 | 0.641 | 0.299 | 0.587 | -1.248 | 1.075 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1n4k_A_389 | 1n4k | A | 389 | 399 | RLRHLCTNTWV | EEEEGGGTEEE | bbbxaaavbbp |
1njk_A_97 | 1njk | A | 107 | 117 | VCIDLKTQKAL | EEEETTTTEEE | bbbbaaavbxx |
1viu_A_47 | 1viu | A | 51 | 61 | LLYNTKKKTVV | EEEETTTTEEE | bbbbaaalbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1njk_A_97 | 1njk | A | MSESELENOMETHIONINE | C - 108 |
1viu_A_47 | 1viu | A | MSESELENOMETHIONINE | Y - 53 |
1viu_A_47 | 1viu | A | MSESELENOMETHIONINE | N - 54 |
1viu_A_47 | 1viu | A | MSESELENOMETHIONINE | T - 55 |
1viu_A_47 | 1viu | A | MSESELENOMETHIONINE | K - 57 |
1viu_A_47 | 1viu | A | MSESELENOMETHIONINE | K - 58 |
1viu_A_47 | 1viu | A | MSESELENOMETHIONINE | T - 59 |
1viu_A_47 | 1viu | A | MSESELENOMETHIONINE | V - 60 |
Clusters included in this Subclass |
CLUSTER: HA.3.221 |