Information on SUBCLASS 5.22.1 |
Subclass Accession number: 7960
Subclass: 5.22.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 14.8 +/- 14.3 Average RMSD (Å) : 0.867 +/- 0.289 Consensus geometry
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Consensus Sequence: | XXpXpPhXX |
(φψ)-conformation: | bppapplbb |
Pattern: | [LT] | [SV] | x | [CTY] | [AN] | x | [ST] | [PSV] | [RS] | [P] | [CGM] | [IKV] | x | [IKV] | [AEL] | x | [FGK] | x |
Conservation: | 0.323 | -0.038 | -0.674 | -0.056 | 0.138 | -0.605 | 1.068 | -0.468 | 0.541 | 3.515 | -0.399 | -0.193 | -0.399 | -0.193 | -0.605 | -0.605 | -0.743 | -0.605 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eyb_A_299 | 1eyb | A | 299 | 316 | TVLTAKSVRPGVAIADFV | EEEEEE-SSTT-EEEEEE | xabbbxxaxpvbxabbbb |
1kw3_B_246 | 1kw3 | B | 246 | 263 | LSFYADTPSPMIEVEFGW | EEEEEE-SSTT-EEEEEE | xbbbbxxaxpvbbbbbbb |
1onc_*_63 | 1onc | - | 65 | 82 | LSDCNVTSRPCKYKLKKS | EEEEEE-SSTT-EEEEEE | bbbbbxxaxpvbbbxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | A - 311 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | I - 312 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | A - 313 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | D - 314 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | F - 315 |
1eyb_A_299 | 1eyb | A | MSESELENOMETHIONINE | V - 316 |
1kw3_B_246 | 1kw3 | B | FE2FE (II) ION | Y - 249 |
1kw3_B_246 | 1kw3 | B | FE2FE (II) ION | E - 260 |
Clusters included in this Subclass |
CLUSTER: HA.5.99 |