Information on SUBCLASS 5.4.4 |
Subclass Accession number: 7939
Subclass: 5.4.4 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 12.1 +/- 14.9 Average RMSD (Å) : 0.633 +/- 0.153 Consensus geometry
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Consensus Sequence: | hXXppXXhX |
(φψ)-conformation: | bbpaalpbb |
Pattern: | [CHQ] | [IL] | x | [DTV] | [EQ] | [NS] | x | x | [ILM] | x | [CS] |
Conservation: | -0.381 | 1.030 | -0.698 | -0.619 | 1.419 | 1.308 | -0.856 | -1.015 | 0.649 | -1.331 | 0.493 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1lc0_A_197 | 1lc0 | A | 203 | 213 | QLETQNKGLLS | EEE-TTS-EEE | bbbxaavxxbb |
1p4k_A_65 | 1p4k | A | 68 | 78 | CIMDENYNIGS | EEE-TTS-EEE | bbbxaalxbbb |
1poi_B_50 | 1poi | B | 50 | 60 | HIIVESGLMDC | EEEETTTEEEE | bxbbaavxxvx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1p4k_A_65 | 1p4k | A | GOLGLYCEROL | D - 66 |
Clusters included in this Subclass |
CLUSTER: HA.4.105 |