Information on SUBCLASS 5.9.3 |
Subclass Accession number: 731
Subclass: 5.9.3 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005529 (>75 %) GO:0030246 (>75 %) SCOP : 50352 (>75 %) 50370 (>75 %) 50371 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 25.0 +/- 17.7 Average RMSD (Å) : 0.300 +/- 0.100 Consensus geometry
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Consensus Sequence: | pXXXXXpXh |
(φψ)-conformation: | bpaabaabb |
Pattern: | [IL] | [RY] | [NP] | x | [MQ] | x | [PQT] | [NS] | x | [CV] | [L] | [DQT] |
Conservation: | 0.904 | -0.009 | 0.313 | -1.206 | 0.599 | -1.401 | -0.720 | 1.177 | -1.012 | 0.270 | 1.709 | -0.623 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1m2t_B_429 | 1m2t | B | 429 | 440 | IRPKQLQSQCLT | EEETT-TTEEEE | bbpaabaabbxb |
1qxm_A_104 | 1qxm | A | 106 | 117 | IRNYMNPNLVLQ | EEESS-TTEEEE | xbxaabaabbxb |
1qxm_A_239 | 1qxm | A | 245 | 256 | LYNLQDTNRVLD | EEETT-TTEEEE | bxxaabaabbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qxm_A_104 | 1qxm | A | EDO1,2-ETHANEDIOL | V - 104 |
1qxm_A_104 | 1qxm | A | EDO1,2-ETHANEDIOL | I - 105 |
Clusters included in this Subclass |
CLUSTER: HA.4.160 |