Information on SUBCLASS 7.13.1 |
Subclass Accession number: 6495
Subclass: 7.13.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 30.6 +/- 28.0 Average RMSD (Å) : 0.340 +/- 0.152 Consensus geometry
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Consensus Sequence: | hpXcppXXpXA |
(φψ)-conformation: | bbabapababb |
Pattern: | [AG] | x | [FLW] | [FLMY] | [HR] | [aci] | [DKN] | [EGQS] | [RT] | x | [HW] | [DRT] | [ILT] | [A] | [ILV] | [AQT] |
Conservation: | 0.537 | -1.358 | -0.011 | -0.206 | 1.500 | -1.330 | 0.054 | -0.658 | 0.488 | -1.036 | 1.499 | -0.897 | -0.188 | 1.774 | 0.553 | -0.723 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f1u_A_188 | 1f1u | A | 190 | 205 | AAWMHRKQTVHDTALT | EEEEESSSSS-SEEEE | bbbbbaxabababbbb |
1kw3_B_180 | 1kw3 | B | 184 | 199 | AHFLHCNGRHHTIALA | EEEEESSSBS-SEEEE | xbbbbNbaxababbbb |
1kw3_B_37 | 1kw3 | B | 37 | 52 | AALYRADQRAWRIAVQ | EEEEESSSBS-SEEEE | bxbbbabaxababbbb |
1lkd_A_182 | 1lkd | A | 185 | 200 | AYFLHCNERHHTLAIA | EEEEESSSBS-SEEEE | bbbbbabaxababbbb |
1lkd_A_38 | 1lkd | A | 38 | 53 | GDLFRIDSRAWRIAVQ | EEEEESSSBS-SEEEE | exbbbabaxababbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f1u_A_188 | 1f1u | A | MW2MANGANESE DIHYDRATE ION | W - 192 |
1f1u_A_188 | 1f1u | A | MW2MANGANESE DIHYDRATE ION | H - 200 |
1f1u_A_188 | 1f1u | A | MW2MANGANESE DIHYDRATE ION | A - 203 |
1kw3_B_180 | 1kw3 | B | FE2FE (II) ION | H - 194 |
1lkd_A_182 | 1lkd | A | P6GHEXAETHYLENE GLYCOL | V - 183 |
1lkd_A_182 | 1lkd | A | BP62',6'-DICHLORO-BIPHENYL-2,6-DIOL | A - 185 |
1lkd_A_182 | 1lkd | A | FE2FE (II) ION | F - 187 |
1lkd_A_182 | 1lkd | A | BP62',6'-DICHLORO-BIPHENYL-2,6-DIOL | F - 187 |
1lkd_A_182 | 1lkd | A | FE2FE (II) ION | H - 189 |
1lkd_A_182 | 1lkd | A | FE2FE (II) ION | H - 195 |
1lkd_A_182 | 1lkd | A | BP62',6'-DICHLORO-BIPHENYL-2,6-DIOL | H - 195 |
Clusters included in this Subclass |
CLUSTER: HA.6.90 |