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Information on SUBCLASS 1.1.7
Subclass Accession number: 5273
Subclass: 1.1.7 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 61.9 +/- 22.3
Average RMSD (Å) : 0.188 +/- 0.083

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XFGGc
(φψ)-conformation: aagbb
Pattern: [ALMVWY][G][HL]x[D][Q]x[AKLM][AG][ILM][AEKQR][W][V][hkqrs][DEKR][N][I][AEQS][agns][F][G][G][DN][P][DGKS][KNQST][IV][MT][ILV][F][G][E]
Conservation:-1.1830.952-0.759-1.4030.9520.574-1.219-1.036-0.404-0.298-0.8352.8440.195-1.037-0.7210.9520.195-0.857-1.2050.9520.9520.9520.0741.331-0.961-0.8870.031-0.348-0.2780.9520.9520.574
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ea5_A_1681ea5   A168199VGLLDQRMALQWVHDNIQFFGGDPKTVTIFGEHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEaaaaaaaaaaaaaaaaaaaavxxaabbbxbbb
1f6w_A_1621f6w   A162193YGLRDQHMAIAWVKRNIAAFGGDPDNITLFGEHHHHHHHHHHHHHHHHTTTTTEEEEEEEEEEEaaaaaaaaaaaaaaaaaaaagxxaaaxbxbbb
1llf_A_1771llf   A177208AGLKDQRLGMQWVADNIAGFGGDPSKVTIFGEHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEaaaaaaaaaaaaaaaaaaaagxxaaaxbxbbb
1mx1_A_11891mx1   A11891220WGHLDQVAALRWVQDNIASFGGNPGSVTIFGEHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEaaaaaaaaaaaaaaaaaaaavxbaabbbbbbb
1p0i_A_1661p0i   A166197MGLFDQQLALQWVQKNIAAFGGNPKSVTLFGEHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEaaaaaaaaaaaaaaaaaaaavbbaabbbxbbb
1qe3_A_1571qe3   A157188LGLLDQAAALKWVRENISAFGGDPDNVTVFGEHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEaaaaaaaaaaaaaaaaaaaavbbaabbbxbbb
1thg_*_1851thg   -185216AGLHDQRKGLEWVSDNIANFGGDPDKVMIFGEHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEaaaaaaaaaaaaaaaaaaaavxxaabbbbbbb
2bce_*_1622bce   -162193YGLWDQHMAIAWVKRNIEAFGGDPDQITLFGEHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEaaaaaaaaaaaaaaaaaaaagxxaaaxbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1llf_A_1771llf   A     NAGN-ACETYL-D-GLUCOSAMINE L - 179
1llf_A_1771llf   A     NAGN-ACETYL-D-GLUCOSAMINE K - 180
1llf_A_1771llf   A     NAGN-ACETYL-D-GLUCOSAMINE R - 183
1llf_A_1771llf   A     NAGN-ACETYL-D-GLUCOSAMINE L - 184
1llf_A_1771llf   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 187
1llf_A_1771llf   A     F23TRICOSANOIC ACID E - 208
1mx1_A_11891mx1   A     THATACRINE E - 1220
1p0i_A_1661p0i   A     NAGN-ACETYL-D-GLUCOSAMINE N - 188
1p0i_A_1661p0i   A     NAGN-ACETYL-D-GLUCOSAMINE K - 190
1p0i_A_1661p0i   A     NAGN-ACETYL-D-GLUCOSAMINE S - 191
1p0i_A_1661p0i   A     BUABUTANOIC ACID E - 197
1p0i_A_1661p0i   A     GOLGLYCEROL E - 197
1thg_*_1851thg   *     NAGN-ACETYL-D-GLUCOSAMINE N - 203

Clusters included in this Subclass
CLUSTER: HE.4.115