Information on SUBCLASS 2.3.6 |
Subclass Accession number: 8230
Subclass: 2.3.6 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 18.3 +/- 17.1 Average RMSD (Å) : 0.857 +/- 0.098 Consensus geometry
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Consensus Sequence: | XXGXXp |
(φψ)-conformation: | aalabb |
Pattern: | x | [AIKLM] | x | x | [ALM] | [aeknr] | [AGKRS] | [ADST] | [FG] | [akl] | [altv] | [CDKRT] | [iv] |
Conservation: | -1.018 | -0.246 | -0.969 | -0.757 | 1.246 | -0.789 | -0.080 | 0.390 | 2.282 | -0.322 | -0.298 | -0.585 | 1.147 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1coy_*_232 | 1coy | - | 232 | 244 | YLAQAAATGKLTI | HHHHHHHTT-EEE | aaaaaaaavabbb |
1f0k_A_288 | 1f0k | A | 292 | 304 | NALPLEKAGAAKI | HHHHHHHTTSEEE | aaaaaaaavabbb |
1g19_A_123 | 1g19 | A | 129 | 141 | IADMLIRSGALDI | HHHHHHHTS-EEE | aaaaaaaavaxab |
1hw6_A_117 | 1hw6 | A | 123 | 135 | KMIELRAAGLTRS | HHHHHHHTTSEEE | aaaaaaaavabab |
1kqn_A_22 | 1kqn | A | 31 | 43 | AKDYMNGTGRYTV | HHHHHHHTSSEEE | aaaaaaaavabbx |
1nuw_A_1072 | 1nuw | A | 1081 | 1093 | VINVLKSSFATCV | HHHHHHHTT-EEE | aaaaaaaavabab |
1olt_A_401 | 1olt | A | 406 | 418 | LLAPLAKDGLVDV | HHHHHHHTTSEEE | aaaaaaaavabxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kqn_A_22 | 1kqn | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | M - 23 |
1kqn_A_22 | 1kqn | A | XEXENON | M - 23 |
1kqn_A_22 | 1kqn | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | H - 24 |
1kqn_A_22 | 1kqn | A | XEXENON | H - 24 |
1kqn_A_22 | 1kqn | A | XEXENON | R - 26 |
1kqn_A_22 | 1kqn | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | L - 27 |
1kqn_A_22 | 1kqn | A | XEXENON | L - 27 |
1kqn_A_22 | 1kqn | A | XEXENON | L - 30 |
1nuw_A_1072 | 1nuw | A | PO3PHOSPHITE ION | D - 1074 |
1nuw_A_1072 | 1nuw | A | MGMAGNESIUM ION | D - 1074 |
Clusters included in this Subclass |
CLUSTER: HE.4.101 |