Information on SUBCLASS 2.6.6 |
Subclass Accession number: 164
Subclass: 2.6.6 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0046914 (>75 %) SCOP : 51734 (>75 %) 51735 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 11.5 +/- 13.2 Average RMSD (Å) : 1.025 +/- 0.096 Consensus geometry
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Consensus Sequence: | XXXXXX |
(φψ)-conformation: | aabpbb |
Pattern: | [AGL] | [GKMT] | [AVY] | [EL] | [AKQR] | x | x | x | [ARS] | x | x | [DKNP] | x | x | x | x |
Conservation: | -0.616 | -1.193 | 0.977 | 1.203 | 1.227 | 0.119 | -1.072 | 0.601 | 1.425 | -0.549 | -0.588 | 0.622 | -1.193 | -0.974 | -1.072 | 1.084 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hyu_A_266 | 1hyu | A | 270 | 285 | AGALKAHVSDYDVDVI | HHHHHHHHHTS-EEEE | aaaaaaaaaabxbxxb |
1m3q_A_152 | 1m3q | A | 157 | 172 | GMVERLCQAFGPRLIQ | HHHHHHHHHHS-EEEE | aaaaaaaaaaxxxabb |
1r1m_A_92 | 1r1m | A | 98 | 113 | LKVLAQRLSRTNIQSV | HHHHHHHHTTS-EEEE | aaaaaaaaaabxxabb |
1sqh_A_199 | 1sqh | A | 199 | 214 | LTYLQALVRFNKSLGI | HHHHHHHHHHS-EEEE | aaaaaaaaaabxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1m3q_A_152 | 1m3q | A | DRZ3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE | I - 152 |
1m3q_A_152 | 1m3q | A | ANG8-AMINOGUANINE | I - 152 |
1m3q_A_152 | 1m3q | A | DRZ3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE | A - 153 |
1m3q_A_152 | 1m3q | A | DRZ3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE | I - 155 |
1m3q_A_152 | 1m3q | A | ANG8-AMINOGUANINE | I - 155 |
1sqh_A_199 | 1sqh | A | MSESELENOMETHIONINE | Y - 201 |
1sqh_A_199 | 1sqh | A | MSESELENOMETHIONINE | L - 202 |
1sqh_A_199 | 1sqh | A | MSESELENOMETHIONINE | L - 205 |
1sqh_A_199 | 1sqh | A | MSESELENOMETHIONINE | K - 210 |
1sqh_A_199 | 1sqh | A | MSESELENOMETHIONINE | S - 211 |
1sqh_A_199 | 1sqh | A | MSESELENOMETHIONINE | L - 212 |
Clusters included in this Subclass |
CLUSTER: HE.3.97 |