Information on SUBCLASS 3.2.11 |
Subclass Accession number: 8315
Subclass: 3.2.11 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 30.2 +/- 23.3 Average RMSD (Å) : 0.467 +/- 0.153 Consensus geometry
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Consensus Sequence: | XXGhpXh |
(φψ)-conformation: | aalpabb |
Pattern: | [MP] | [DK] | [KR] | [LM] | [FV] | [ENS] | [FLY] | [AG] | [EK] | [ANS] | [AS] | [E] | [EG] | [CNR] | [G] | [FIY] | [DEQ] | [TV] | [IV] | [IW] | [AL] |
Conservation: | -0.285 | -0.170 | 0.844 | 0.486 | -0.313 | -0.649 | -0.269 | -0.211 | 0.454 | -0.934 | -0.083 | 2.013 | -0.739 | -1.505 | 2.869 | -0.269 | 0.017 | -0.354 | 0.744 | -0.736 | -0.911 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1luc_A_17 | 1luc | A | 21 | 41 | MKRLVNLGKASEGCGFDTVWL | HHHHHHHHHHTGGGT-SEEEE | aaaaaaaaaaaaaavxabbbb |
1o4v_A_42 | 1o4v | A | 42 | 62 | PDRMFEYAKNAEERGIEVIIA | HHHHHHHHHHTTTTT--EEEE | aaaaaaaaaaaaaavxabbbb |
1qcz_A_48 | 1qcz | A | 48 | 68 | PDKLFSFAESAEENGYQVIIA | HHHHHHHHHHTTTTT-SEEEE | aaaaaaaaaaaaaavxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1luc_A_17 | 1luc | A | MGMAGNESIUM ION | E - 19 |
1luc_A_17 | 1luc | A | EDO1,2-ETHANEDIOL | L - 24 |
1luc_A_17 | 1luc | A | EDO1,2-ETHANEDIOL | V - 25 |
1luc_A_17 | 1luc | A | EDO1,2-ETHANEDIOL | N - 26 |
1luc_A_17 | 1luc | A | EDO1,2-ETHANEDIOL | L - 27 |
1luc_A_17 | 1luc | A | EDO1,2-ETHANEDIOL | G - 28 |
1luc_A_17 | 1luc | A | EDO1,2-ETHANEDIOL | K - 29 |
1luc_A_17 | 1luc | A | EDO1,2-ETHANEDIOL | V - 39 |
1luc_A_17 | 1luc | A | EDO1,2-ETHANEDIOL | L - 41 |
1qcz_A_48 | 1qcz | A | MSESELENOMETHIONINE | L - 51 |
1qcz_A_48 | 1qcz | A | MSESELENOMETHIONINE | F - 52 |
1qcz_A_48 | 1qcz | A | MSESELENOMETHIONINE | A - 55 |
1qcz_A_48 | 1qcz | A | MSESELENOMETHIONINE | I - 67 |
1qcz_A_48 | 1qcz | A | MSESELENOMETHIONINE | A - 68 |
1qcz_A_48 | 1qcz | A | MSESELENOMETHIONINE | G - 69 |
1qcz_A_48 | 1qcz | A | MSESELENOMETHIONINE | A - 70 |
Clusters included in this Subclass |
CLUSTER: HE.6.108 |