Information on SUBCLASS 4.69.1 |
Subclass Accession number: 5729
Subclass: 4.69.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7 (>75 %) 2.7.1 (>75 %) 2.7.1.69 GO : GO:0005351 (>50 %) GO:0005386 (>50 %) GO:0008982 (>50 %) GO:0015144 (>50 %) GO:0015290 (>50 %) GO:0015291 (>50 %) GO:0015455 (>50 %) GO:0016772 (>50 %) GO:0016773 (>50 %) GO:0051119 (>50 %) SCOP : 51229 (>75 %) 51261 (>75 %) 51262 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 16.7 +/- 16.3 Average RMSD (Å) : 0.900 +/- 0.200 Consensus geometry
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Consensus Sequence: | ppGhXhph |
(φψ)-conformation: | aagpbpbb |
Pattern: | x | [ADN] | [LM] | [AIL] | [DEK] | [IK] | [ALV] | [AMT] | [RS] | [KSY] | [G] | [FVW] | [AKQ] | [IP] | [KQR] | [VY] | [AGI] | [KLT] |
Conservation: | -0.448 | -0.526 | 1.133 | -0.350 | 0.353 | -0.677 | -0.350 | -0.526 | 0.047 | -0.701 | 3.339 | -0.086 | -0.350 | 0.209 | 0.616 | 0.247 | -1.053 | -0.877 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bvy_F_492 | 1bvy | F | 498 | 515 | RDLADIAMSKGFAPQVAT | HHHHHHHHTTT---EEEE | aaaaaaaaaavxbxbbbx |
1kzf_A_144 | 1kzf | A | 144 | 161 | RAMLKILTRSGWQIKVIK | HHHHHHHHHH----EEEE | aaaaaaaaaagpxxbxab |
1q0p_A_258 | 1q0p | A | 269 | 286 | VNLIEKVASYGVKPRYGL | HHHHHHHHTTT---EEEE | aaaaaaaaaavbbxxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bvy_F_492 | 1bvy | F | FMNFLAVIN MONONUCLEOTIDE | T - 492 |
1bvy_F_492 | 1bvy | F | EDO1,2-ETHANEDIOL | T - 492 |
1bvy_F_492 | 1bvy | F | FMNFLAVIN MONONUCLEOTIDE | A - 493 |
1bvy_F_492 | 1bvy | F | FMNFLAVIN MONONUCLEOTIDE | E - 494 |
1bvy_F_492 | 1bvy | F | EDO1,2-ETHANEDIOL | G - 495 |
1bvy_F_492 | 1bvy | F | EDO1,2-ETHANEDIOL | T - 496 |
1bvy_F_492 | 1bvy | F | EDO1,2-ETHANEDIOL | D - 499 |
Clusters included in this Subclass |
CLUSTER: HE.5.326 |