Information on SUBCLASS 8.11.1 |
Subclass Accession number: 5975
Subclass: 8.11.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.1 (>75 %) 3.1.1 (>75 %) 3.1.1.43.2 (>75 %) 3.2.1 (>75 %) 3.2.1.113 (>75 %) GO : GO:0004553 (>75 %) GO:0005509 (>75 %) GO:0005509 (>75 %) GO:0015923 (>75 %) GO:0016298 (>75 %) GO:0016788 (>75 %) GO:0016789 (>75 %) GO:0016798 (>75 %) SCOP : 48207 (>75 %) 48225 (>75 %) 48226 (>75 %) 48618 (>75 %) 48619 (>75 %) 48623 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 28.0 +/- 20.4 Average RMSD (Å) : 0.425 +/- 0.150 Consensus geometry
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Consensus Sequence: | cppXpchhPEhh |
(φψ)-conformation: | aapaalbppabb |
Pattern: | [KQ] | [DHKS] | x | [ILW] | [DE] | [FL] | [AG] | [AIKL] | [EGK] | [IL] | [ATV] | [DRS] | [GST] | [CY] | [EFHY] | [AEGQ] | x | [Y] | [KNT] | [QRS] | [ST] | x | [STV] | [GK] | [IL] | [AG] | [P] | [DE] | x | [FVW] | x |
Conservation: | 0.580 | -0.802 | -0.224 | -0.534 | 1.148 | 0.095 | 0.553 | -1.170 | -0.577 | 0.411 | -0.470 | -0.546 | -0.437 | 1.172 | -0.472 | -0.913 | -0.446 | 2.761 | -0.263 | -0.260 | 0.524 | -1.170 | -0.605 | -0.314 | 0.411 | 0.553 | 2.761 | 0.901 | -1.133 | -0.220 | -1.317 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dl2_A_372 | 1dl2 | A | 372 | 402 | KSDWDLAKGITDTCYQMYKQSSSGLAPEIVV | HHHHHHHHHHHHHHHHHHHTSTTS---SEEE | aaaaaaaaaaaaaaaaaaaaxaavbxxabbb |
1hcu_A_326 | 1hcu | A | 326 | 356 | QKYIDFGIKLASSYFGTYTQTASGIGPEGFA | HHHHHHHHHHHHHHHHHHHTSSSS---SEEE | aaaaaaaaaaaaaaaaaaaaxaavbxxabbb |
1kre_A_348 | 1kre | A | 348 | 378 | QDFIDFGLELVDGCEATYNSTLTKIGPDSWG | HHHHHHHHHHHHHHHHHHHTSSSS---SEEE | aaaaaaaaaaaaaaaaaaaaxaavbxxabbb |
1nxc_A_496 | 1nxc | A | 497 | 527 | QHYLELGAEIARTCHESYNRTYVKLGPEAFR | HHHHHHHHHHHHHHHHHHHTSSSSS--SEEE | aaaaaaaaaaaaaaaaaaaabaavbxxabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kre_A_348 | 1kre | A | MANALPHA-D-MANNOSE | Q - 348 |
1kre_A_348 | 1kre | A | MANALPHA-D-MANNOSE | I - 351 |
1kre_A_348 | 1kre | A | MANALPHA-D-MANNOSE | D - 352 |
1kre_A_348 | 1kre | A | MANALPHA-D-MANNOSE | L - 355 |
1kre_A_348 | 1kre | A | NAGN-ACETYL-D-GLUCOSAMINE | V - 358 |
1kre_A_348 | 1kre | A | NAGN-ACETYL-D-GLUCOSAMINE | D - 359 |
1kre_A_348 | 1kre | A | MANALPHA-D-MANNOSE | D - 359 |
1kre_A_348 | 1kre | A | NAGN-ACETYL-D-GLUCOSAMINE | G - 360 |
1kre_A_348 | 1kre | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 362 |
1kre_A_348 | 1kre | A | NAGN-ACETYL-D-GLUCOSAMINE | A - 363 |
1kre_A_348 | 1kre | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 366 |
1nxc_A_496 | 1nxc | A | NAGN-ACETYL-D-GLUCOSAMINE | H - 511 |
1nxc_A_496 | 1nxc | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 512 |
1nxc_A_496 | 1nxc | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 515 |
1nxc_A_496 | 1nxc | A | NAGN-ACETYL-D-GLUCOSAMINE | R - 516 |
1nxc_A_496 | 1nxc | A | NAGN-ACETYL-D-GLUCOSAMINE | K - 520 |
Clusters included in this Subclass |
CLUSTER: HE.8.27 |