Information on SUBCLASS 1.1.61 |
Subclass Accession number: 4408
Subclass: 1.1.61 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.11 (>75 %) 1.11.1 (>75 %) 1.11.1.14 GO : GO:0004601 (>75 %) GO:0005509 (>75 %) GO:0016684 (>75 %) GO:0016690 (>75 %) SCOP : 48112 (>75 %) 48113 (>75 %) 48114 (>75 %) |
Number of loops: 2 Average sequence ID (%) : 88.2 +/- 0.0 Average RMSD (Å) : 0.100 +/- 0.000 Consensus geometry
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Consensus Sequence: | ARDSR |
(φψ)-conformation: | aapaa |
Pattern: | [Q] | [ST] | [D] | [H] | [T] | [IL] | [A] | [R] | [D] | [S] | [R] | [T] | [A] | [C] | [E] | [W] | [Q] |
Conservation: | -0.216 | -1.280 | 0.257 | 1.203 | -0.216 | -1.162 | -0.689 | -0.216 | 0.257 | -0.689 | -0.216 | -0.216 | -0.689 | 1.676 | -0.216 | 2.622 | -0.216 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b80_A_236 | 1b80 | A | 236 | 252 | QSDHTIARDSRTACEWQ | HHHHHHTTSTTTHHHHH | aaaaaaaaxaaaaaaaa |
1llp_*_236 | 1llp | - | 236 | 252 | QTDHTLARDSRTACEWQ | HHHHHHTTSTTTHHHHH | aaaaaaaaxaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b80_A_236 | 1b80 | A | CACALCIUM ION | S - 237 |
1b80_A_236 | 1b80 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | S - 237 |
1b80_A_236 | 1b80 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | D - 238 |
1b80_A_236 | 1b80 | A | CACALCIUM ION | I - 241 |
1b80_A_236 | 1b80 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 241 |
1b80_A_236 | 1b80 | A | HTRBETA-HYDROXYTRYPTOPHANE | E - 250 |
1llp_*_236 | 1llp | * | HEMPROTOPORPHYRIN IX CONTAINING FE | T - 237 |
1llp_*_236 | 1llp | * | CACALCIUM ION | T - 237 |
1llp_*_236 | 1llp | * | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 241 |
1llp_*_236 | 1llp | * | NGAN-ACETYL-D-GALACTOSAMINE | C - 249 |
1llp_*_236 | 1llp | * | NGAN-ACETYL-D-GALACTOSAMINE | E - 250 |
1llp_*_236 | 1llp | * | NGAN-ACETYL-D-GALACTOSAMINE | Q - 252 |
Clusters included in this Subclass |
CLUSTER: HH.6.205 |