Information on SUBCLASS 2.1.18 |
Subclass Accession number: 8900
Subclass: 2.1.18 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 3.1 +/- 6.2 Average RMSD (Å) : 0.660 +/- 0.230 Consensus geometry
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Consensus Sequence: | XXXXhp |
(φψ)-conformation: | aappaa |
Pattern: | [lmvw] | x | [ADEQS] | [altv] | [FILM] | [prs] | x | x | [dps] | [alpy] | [EHKQS] | [dtv] | x |
Conservation: | -0.297 | -0.944 | 0.869 | -0.297 | 2.411 | -0.736 | -0.620 | -0.750 | 0.392 | -1.138 | 1.192 | -0.044 | -0.038 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bj4_A_13 | 1bj4 | A | 17 | 29 | SHDAMLAQPLKDS | HHHHHTTS-HHHH | aaaaaaaxxaaaa |
1k04_A_950 | 1k04 | A | 968 | 980 | VDETIPLLPASTH | HHHHGGGS-HHHH | aaaaaaabpaaaa |
1kiy_A_255 | 1kiy | A | 273 | 285 | MVAVFSDKDPQVM | HHHHHTTS-HHHH | aaaaaaaxpaaaa |
1lwy_A_222 | 1lwy | A | 224 | 236 | WLQQLRESSYEEA | HHHHTTTS-HHHH | aaaaaaaxxaaaa |
1tml_*_118 | 1tml | - | 118 | 130 | LISLMSSCMQHVQ | HHHHHTTS-HHHH | aaaaaaabpaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kiy_A_255 | 1kiy | A | EDO1,2-ETHANEDIOL | Y - 295 |
1kiy_A_255 | 1kiy | A | EDO1,2-ETHANEDIOL | W - 298 |
Clusters included in this Subclass |
CLUSTER: HH.4.109 |
CLUSTER: HH.5.100 |