Information on SUBCLASS 2.2.11 |
Subclass Accession number: 8927
Subclass: 2.2.11 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 17.8 +/- 16.0 Average RMSD (Å) : 0.767 +/- 0.208 Consensus geometry
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Consensus Sequence: | XXGXXX |
(φψ)-conformation: | aalpaa |
Pattern: | x | x | [ALW] | x | [EKL] | [AGN] | [G] | [DV] | [DKW] | [AR] | x | [IM] | [ADE] | [AR] | [CDH] |
Conservation: | -0.654 | -0.323 | -0.654 | -0.571 | -0.737 | -0.240 | 3.237 | -0.053 | -0.737 | 0.387 | 0.051 | 0.812 | -0.157 | 0.125 | -0.488 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1k0i_A_50 | 1k0i | A | 54 | 68 | DLLREAGVDRRMARD | HHHHHTT--HHHHHH | aaaaaavbaaaaaaa |
1mxs_A_201 | 1mxs | A | 201 | 215 | SSWIKNGDWARIEAC | HHHHHTT-HHHHHHH | aaaaaavxaaaaaaa |
1p4d_A_88 | 1p4d | A | 92 | 106 | MMAMLGGDKRLIDAH | HHHHTS--THHHHHH | aaaaaaUxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | K - 100 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | R - 101 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | L - 102 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | I - 103 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | D - 104 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | A - 105 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | N - 107 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | Q - 108 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | V - 110 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | D - 111 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | F - 112 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | V - 114 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | R - 115 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | Q - 116 |
1p4d_A_88 | 1p4d | A | EGLETHYLENE GLYCOL | E - 118 |
Clusters included in this Subclass |
CLUSTER: HH.4.198 |