Information on SUBCLASS 2.4.2 |
Subclass Accession number: 2236
Subclass: 2.4.2 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 17.5 +/- 16.0 Average RMSD (Å) : 0.500 +/- 0.200 Consensus geometry
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Consensus Sequence: | XXGDhX |
(φψ)-conformation: | aalbaa |
Pattern: | [as] | x | [AFKLV] | [dgv] | x | [AEFK] | [glw] | x | [egqr] | x | [EG] | [DY] | [pvwy] | [AENR] | [GKLT] | [ALY] |
Conservation: | 0.931 | -0.663 | -0.496 | -1.020 | -0.680 | -0.353 | -0.760 | 0.077 | -0.643 | -0.048 | 2.285 | 2.185 | -0.680 | 0.050 | -0.506 | 0.322 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bo4_A_37 | 1bo4 | A | 42 | 57 | AALDLFGREFGDVATY | HHHHHHHHHTT-HHHH | aaaaaaaaaavbaaaa |
1dxy_*_120 | 1dxy | - | 120 | 135 | MGKVQAQLQAGDYEKA | HHHHHHHHHTT-HHHH | aaaaaaaaaavbaaaa |
1iq0_A_361 | 1iq0 | A | 362 | 377 | ALVRAALALAGYPALA | HHHHHHHHHTT-HHHH | aaaaaaaaaavbaaaa |
1ni9_A_6 | 1ni9 | A | 17 | 32 | ALAGYKWLGRGDKNTA | HHHHHHHHHTT-HHHH | aaaaaaaaaavxaaaa |
1qsa_A_69 | 1qsa | A | 76 | 91 | SRFVNELARREDWRGL | HHHHHHHHHTT-HHHH | aaaaaaaaaavxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bo4_A_37 | 1bo4 | A | COACOENZYME A | E - 50 |
1bo4_A_37 | 1bo4 | A | SPDSPERMIDINE | F - 51 |
1bo4_A_37 | 1bo4 | A | COACOENZYME A | F - 51 |
1bo4_A_37 | 1bo4 | A | SPDSPERMIDINE | Y - 57 |
Clusters included in this Subclass |
CLUSTER: HH.3.117 |
CLUSTER: HH.4.131 |