Information on SUBCLASS 24.1.1 |
Subclass Accession number: 9264
Subclass: 24.1.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 69.9 +/- -23.3 Average RMSD (Å) : 0.133 +/- 0.058 Consensus geometry
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Consensus Sequence: | XppLRTGAPXchppGPLPXACWpCKSPD |
(φψ)-conformation: | aapaaaebpabaabeabpaaaaaaabaa |
Pattern: | [A] | [LV] | [QT] | [D] | [NV] | x | [EN] | [ST] | [L] | [R] | [T] | [G] | [A] | [P] | [KV] | [DN] | [AG] | [EK] | [DT] | [G] | [P] | [L] | [P] | x | [A] | [C] | [W] | [ST] | [C] | [K] | [S] | [P] | [D] | [V] | [AP] | [R] | [IL] | [I] | [EQ] | [EKQ] | [D] |
Conservation: | -0.160 | -0.811 | -1.026 | 0.712 | -1.429 | -1.566 | -0.684 | -0.647 | -0.160 | 0.276 | 0.276 | 0.712 | -0.160 | 1.148 | -1.368 | -0.373 | -0.856 | -0.592 | -0.932 | 0.712 | 1.148 | -0.160 | 1.148 | -1.323 | -0.160 | 2.021 | 2.893 | -0.686 | 2.021 | 0.276 | -0.160 | 1.148 | 0.712 | -0.160 | -0.871 | 0.276 | -0.585 | -0.160 | -0.375 | -0.790 | 0.712 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fs7_A_105 | 1fs7 | A | 105 | 145 | ALQDNINTLRTGAPVDGKTGPLPSACWTCKSPDVPRIIEQD | HHHHHHHSGGG---SSTT-SSSBGGGGTTT-THHHHHHHHH | aaaaaaapaaaebxabaabeabxaaaaaaabaaaaaaaaaa |
1gu6_A_97 | 1gu6 | A | 97 | 137 | AVTDVRETLRTGAPKNAEDGPLPMACWSCKSPDVARLIQKD | HHHHHHH-GGG---SSTT-SSSBGGGGTTT-THHHHHHHHH | aaaaaaapaaaebpabaaxeabxaaaaaaabaaaaaaaaaa |
1qdb_A_104 | 1qdb | A | 104 | 144 | ALQDNVNSLRTGAPVDAKTGPLPTACWTCKSPDVPRLIEED | HHHHHHHSGGG---SSTT-SSSBGGGGTTT-THHHHHHHHH | aaaaaaaxaaaebxabaabeabwaaaaaaabaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gu6_A_97 | 1gu6 | A | HA3HEC BINDING SITE FOR CHAIN A | A - 97 |
1gu6_A_97 | 1gu6 | A | HA1HEC BINDING SITE FOR CHAIN A | T - 104 |
1gu6_A_97 | 1gu6 | A | HA1HEC BINDING SITE FOR CHAIN A | R - 106 |
1gu6_A_97 | 1gu6 | A | HA1HEC BINDING SITE FOR CHAIN A | K - 126 |
Clusters included in this Subclass |
CLUSTER: HH.24.1 |