Information on SUBCLASS 3.21.1 |
Subclass Accession number: 9027
Subclass: 3.21.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 15.0 +/- 15.2 Average RMSD (Å) : 0.400 +/- 0.100 Consensus geometry
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Consensus Sequence: | pXchphX |
(φψ)-conformation: | aalwpaa |
Pattern: | x | [AST] | [AL] | [FMY] | [ALV] | [ADR] | [DEQ] | x | [DN] | [LP] | [ST] | [FMP] | [AD] | [AE] | [KL] | [ATV] | [AE] | [ILV] | [AKL] | [ATV] |
Conservation: | -0.032 | 0.127 | -0.019 | 0.747 | -0.492 | -1.359 | 0.994 | -1.854 | 2.145 | 0.263 | 1.467 | -1.235 | 0.318 | 0.373 | -0.454 | -0.368 | 0.110 | 0.994 | -1.359 | -0.368 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b4u_A_57 | 1b4u | A | 57 | 76 | ESAYLDEWNLTPAAKAAVLA | HHHHHHTTT--HHHHHHHHH | aaaaaaaavxpaaaaaaaaa |
1l0o_A_15 | 1l0o | A | 23 | 42 | VAAFVAQLDPTMDELTEIKT | HHHHHGGG---HHHHHHHHH | aaaaaaaalwxaaaaaaaaa |
1pdo_*_95 | 1pdo | - | 100 | 119 | ETLMARDDDPSFDELVALAV | HHHHHHTT---HHHHHHHHH | aaaaaaaalwxaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1l0o_A_15 | 1l0o | A | MGMAGNESIUM ION | E - 46 |
1l0o_A_15 | 1l0o | A | ADPADENOSINE-5'-DIPHOSPHATE | E - 46 |
1l0o_A_15 | 1l0o | A | ADPADENOSINE-5'-DIPHOSPHATE | A - 47 |
1l0o_A_15 | 1l0o | A | MGMAGNESIUM ION | T - 49 |
1l0o_A_15 | 1l0o | A | MGMAGNESIUM ION | N - 50 |
1l0o_A_15 | 1l0o | A | ADPADENOSINE-5'-DIPHOSPHATE | N - 50 |
1l0o_A_15 | 1l0o | A | ADPADENOSINE-5'-DIPHOSPHATE | A - 51 |
1l0o_A_15 | 1l0o | A | ADPADENOSINE-5'-DIPHOSPHATE | I - 52 |
1l0o_A_15 | 1l0o | A | MGMAGNESIUM ION | I - 53 |
1l0o_A_15 | 1l0o | A | ADPADENOSINE-5'-DIPHOSPHATE | I - 53 |
Clusters included in this Subclass |
CLUSTER: HH.5.132 |