Information on SUBCLASS 4.16.1 |
Subclass Accession number: 9064
Subclass: 4.16.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 10.0 +/- 0.0 Average RMSD (Å) : 0.400 +/- 0.000 Consensus geometry
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Consensus Sequence: | pXXXXSXh |
(φψ)-conformation: | aapaapaa |
Pattern: | [IL] | [AD] | [LY] | [EL] | [V] | [GR] | [RS] | [LW] | [LY] | x | [NS] | [GT] | x | [NP] | [GT] | [S] | [FH] | [FV] | [NV] | [RT] |
Conservation: | 0.913 | -0.799 | 0.057 | -1.656 | 2.055 | -0.514 | -0.514 | 0.628 | 0.057 | -1.085 | 0.913 | -0.514 | -0.228 | 0.057 | -0.514 | 2.055 | 0.913 | -0.228 | -1.370 | -0.228 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gx3_A_186 | 1gx3 | A | 187 | 206 | IDLEVGSWYVSTHPGSHFVT | HHHHHHHHHHHH-TT-HHHH | aaaaaaaaaaaaxaaxaaaa |
1k87_A_550 | 1k87 | A | 550 | 569 | LAYLVRRLLENGANTSFVNR | HHHHHHHHHHHH-TTSHHHH | aaaaaaaaaaaaxaaxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1k87_A_550 | 1k87 | A | LACLACTIC ACID | Y - 552 |
1k87_A_550 | 1k87 | A | LACLACTIC ACID | R - 555 |
1k87_A_550 | 1k87 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 556 |
1k87_A_550 | 1k87 | A | 1PEPENTAETHYLENE GLYCOL | R - 556 |
1k87_A_550 | 1k87 | A | LACLACTIC ACID | R - 556 |
1k87_A_550 | 1k87 | A | 1PEPENTAETHYLENE GLYCOL | L - 557 |
1k87_A_550 | 1k87 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 559 |
1k87_A_550 | 1k87 | A | 1PEPENTAETHYLENE GLYCOL | N - 560 |
1k87_A_550 | 1k87 | A | 1PEPENTAETHYLENE GLYCOL | G - 561 |
1k87_A_550 | 1k87 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 562 |
1k87_A_550 | 1k87 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 564 |
1k87_A_550 | 1k87 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | T - 564 |
1k87_A_550 | 1k87 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | S - 565 |
1k87_A_550 | 1k87 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 566 |
1k87_A_550 | 1k87 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 567 |
1k87_A_550 | 1k87 | A | 1PEPENTAETHYLENE GLYCOL | V - 567 |
1k87_A_550 | 1k87 | A | 1PEPENTAETHYLENE GLYCOL | N - 568 |
Clusters included in this Subclass |
CLUSTER: HH.3.185 |