Information on SUBCLASS 4.48.1 |
Subclass Accession number: 4859
Subclass: 4.48.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.14 (>50 %) 1.14.99 (>50 %) 1.14.99.1 GO : GO:0004601 (>50 %) GO:0004666 (>50 %) GO:0016684 (>50 %) GO:0016701 (>50 %) GO:0016702 (>50 %) GO:0016705 (>50 %) GO:0051213 (>50 %) SCOP : 48112 (>50 %) 48113 (>50 %) 48132 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 18.7 +/- 26.6 Average RMSD (Å) : 0.367 +/- 0.115 Consensus geometry
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Consensus Sequence: | XXpXpXXc |
(φψ)-conformation: | aalpppaa |
Pattern: | x | x | [KV] | [AD] | [KMV] | x | [ASV] | [IK] | [DK] | [EQR] | [DS] | [GR] | x | [ELM] | [EKR] | x | [QY] | [PS] | x | [DN] | [EK] | [IY] | [DR] | [EK] | x |
Conservation: | -1.343 | -0.029 | -0.400 | -0.247 | -0.577 | -1.672 | -0.577 | -0.870 | 0.725 | 0.628 | 0.694 | 0.115 | -1.343 | -0.796 | 0.628 | -1.015 | 0.738 | 1.368 | -1.124 | 1.889 | 1.374 | 1.005 | 0.115 | 1.374 | -0.660 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cvu_A_445 | 1cvu | A | 445 | 469 | QAVAKASIDQSREMKYQSLNEYRKR | HHHHHHHHHHHHHTT---HHHHHHH | aaaaaaaaaaaaaalxxpaaaaaaa |
1m1n_B_18 | 1m1n | B | 19 | 43 | DYKDMLAKKRDGFEEKYPQDKIDEV | HHHHHHHHHHHHHT----HHHHHHH | aaaaaaaaaaaaaalxpwaaaaaaa |
1q4g_A_445 | 1q4g | A | 445 | 469 | LHVAVDVIKESRVLRLQPFNEYRKR | HHHHHHHHHHHHHTT---HHHHHHH | aaaaaaaaaaaaaalxxxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cvu_A_445 | 1cvu | A | BOGB-OCTYLGLUCOSIDE | Q - 445 |
1cvu_A_445 | 1cvu | A | BOGB-OCTYLGLUCOSIDE | S - 451 |
1cvu_A_445 | 1cvu | A | BOGB-OCTYLGLUCOSIDE | Q - 454 |
1q4g_A_445 | 1q4g | A | HEMPROTOPORPHYRIN IX CONTAINING FE | H - 446 |
1q4g_A_445 | 1q4g | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 447 |
1q4g_A_445 | 1q4g | A | HEMPROTOPORPHYRIN IX CONTAINING FE | D - 450 |
Clusters included in this Subclass |
CLUSTER: HH.4.289 |