Information on SUBCLASS 4.7.5 |
Subclass Accession number: 4797
Subclass: 4.7.5 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004872 (>50 %) GO:0004888 (>50 %) SCOP : 47161 (>50 %) 47170 (>50 %) 47171 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 24.1 +/- 31.1 Average RMSD (Å) : 0.833 +/- 0.321 Consensus geometry
|
Consensus Sequence: | cphXhhXX |
(φψ)-conformation: | aappppaa |
Pattern: | [LY] | [AI] | [QR] | [AR] | [AD] | [AIT] | x | [AY] | [AFK] | x | [FL] | [GK] | [NQS] | [IM] | [AKT] | [IP] | [CL] | [KP] | [AEK] | [CM] | x | [ADE] | [ANT] | [SV] | x | [N] | [IV] | x | [EN] |
Conservation: | 0.145 | -0.298 | 0.957 | -0.150 | -0.413 | -0.777 | 0.731 | 0.150 | -1.339 | -1.339 | 0.685 | -0.127 | -0.026 | 0.810 | -0.683 | -0.261 | 0.439 | 0.708 | -0.495 | 0.725 | -0.964 | -0.401 | -0.589 | -0.708 | -1.339 | 3.444 | 1.379 | -0.957 | 0.694 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1oyz_A_68 | 1oyz | A | 68 | 96 | YIRRDIGAFILGQIKICKKCEDNVFNILN | HHHHHHHHHHHHHS---TTTHHHHHHHHH | aaaaaaaaaaaaaxxbpaaaaaaaaaaaa |
2asr_*_86 | 2asr | - | 97 | 125 | LAQAATHYKKFKSMAPLPEMVATSRNIDE | HHHHHHHHHHHHHS---GGGHHHHHHHHH | aaaaaaaaaaaaaxpxxaaaaaaaaaaaa |
2lig_A_89 | 2lig | A | 97 | 125 | LAQAAAHYANFKNMTPLPAMAEASANVDE | HHHHHHHHHHHHHS---GGGHHHHHHHHH | aaaaaaaaaaaaaxppxaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1oyz_A_68 | 1oyz | A | MSESELENOMETHIONINE | R - 71 |
1oyz_A_68 | 1oyz | A | MSESELENOMETHIONINE | D - 72 |
1oyz_A_68 | 1oyz | A | MSESELENOMETHIONINE | G - 74 |
1oyz_A_68 | 1oyz | A | MSESELENOMETHIONINE | A - 75 |
1oyz_A_68 | 1oyz | A | MSESELENOMETHIONINE | L - 78 |
1oyz_A_68 | 1oyz | A | MSESELENOMETHIONINE | N - 93 |
1oyz_A_68 | 1oyz | A | MSESELENOMETHIONINE | I - 94 |
1oyz_A_68 | 1oyz | A | MSESELENOMETHIONINE | L - 95 |
1oyz_A_68 | 1oyz | A | MSESELENOMETHIONINE | N - 96 |
Clusters included in this Subclass |
CLUSTER: HH.6.110 |