Information on SUBCLASS 5.26.1 |
Subclass Accession number: 4918
Subclass: 5.26.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 8.6 +/- 9.4 Average RMSD (Å) : 1.075 +/- 0.320 Consensus geometry
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Consensus Sequence: | XhcXchXXh |
(φψ)-conformation: | aalpappaa |
Pattern: | [ALT] | [AEKL] | x | [GLV] | x | [AKTV] | [AILV] | x | x | x | [AFLY] | [GNQ] | x | [DNP] | x | [GPST] | x | x | [ET] | [ILV] | x | [DQR] | [ILMV] | [AGIL] | [NQRT] | [EKQ] | [FGTV] |
Conservation: | 0.218 | -0.834 | -1.049 | -0.438 | -1.192 | -0.405 | 0.597 | -1.049 | -0.476 | -0.787 | -0.047 | 0.800 | -0.410 | 1.068 | -0.402 | -0.262 | -0.906 | 0.300 | 1.973 | 1.881 | -0.834 | 0.791 | 1.527 | -0.977 | 0.239 | 1.863 | -1.192 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fi4_A_120 | 1fi4 | A | 126 | 152 | AALVSAIAKLYQLPQSTSEISRIARKG | HHHHHHHHHHTT--S-HHHHHHHHHHH | aaaaaaaaaaalxappaaaaaaaaaaa |
1mzb_A_35 | 1mzb | A | 35 | 61 | AEDVYKALMEAGEDVGLATVYRVLTQF | HHHHHHHHHHTT----HHHHHHHHHHH | aaaaaaaaaaalxabxaaaaaaaaaaa |
1n0y_A_29 | 1n0y | A | 29 | 55 | TKELGTVMRSLGQNPTEAELQDMINEV | HHHHHHHHHTTT----HHHHHHHHHHH | aaaaaaaaaaavbaxxaaaaaaaaaaa |
1pie_A_138 | 1pie | A | 144 | 170 | LLVGVVLDDLFNLNVPRLELVQLGQKT | HHHHHHHHHHTT----HHHHHHHHHHH | aaaaaaaaaaalxaxxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fi4_A_120 | 1fi4 | A | MSESELENOMETHIONINE | Y - 136 |
1fi4_A_120 | 1fi4 | A | MSESELENOMETHIONINE | Q - 137 |
1fi4_A_120 | 1fi4 | A | MSESELENOMETHIONINE | L - 138 |
1fi4_A_120 | 1fi4 | A | MSESELENOMETHIONINE | P - 139 |
1fi4_A_120 | 1fi4 | A | MSESELENOMETHIONINE | Q - 140 |
1fi4_A_120 | 1fi4 | A | MSESELENOMETHIONINE | S - 143 |
1fi4_A_120 | 1fi4 | A | MSESELENOMETHIONINE | E - 144 |
1fi4_A_120 | 1fi4 | A | MSESELENOMETHIONINE | S - 146 |
1fi4_A_120 | 1fi4 | A | MSESELENOMETHIONINE | R - 147 |
1fi4_A_120 | 1fi4 | A | MSESELENOMETHIONINE | R - 150 |
1n0y_A_29 | 1n0y | A | PBLEAD (II) ION | E - 31 |
1pie_A_138 | 1pie | A | PO4PHOSPHATE ION | S - 138 |
1pie_A_138 | 1pie | A | PO4PHOSPHATE ION | S - 139 |
1pie_A_138 | 1pie | A | GALD-GALACTOSE | E - 171 |
Clusters included in this Subclass |
CLUSTER: HH.6.91 |