Information on SUBCLASS 6.1.3 |
Subclass Accession number: 4939
Subclass: 6.1.3 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.1 (>50 %) 3.1.1 (>50 %) 3.1.1.3 GO : GO:0016298 (>75 %) GO:0016788 (>75 %) GO:0016789 (>75 %) SCOP : 53473 (>75 %) 53474 (>75 %) 53577 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 78.6 +/- -42.6 Average RMSD (Å) : 0.433 +/- 0.058 Consensus geometry
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Consensus Sequence: | WpGTpcFhAC |
(φψ)-conformation: | aalabpbpaa |
Pattern: | [IL] | [DN] | [G] | [I] | [W] | [EQ] | [G] | [T] | [QR] | [DN] | [F] | [AV] | [A] | [C] | [N] | [H] | [L] | [R] | [S] | [Y] | [K] | [Y] | [Y] | [AST] | [DES] | [S] | [I] | [L] |
Conservation: | -0.899 | -0.665 | 0.487 | -0.441 | 2.808 | -0.666 | 0.487 | 0.023 | -0.898 | -0.665 | 0.487 | -1.360 | -0.441 | 1.880 | 0.487 | 1.416 | -0.441 | 0.023 | -0.441 | 0.952 | 0.023 | 0.952 | 0.952 | -1.421 | -1.318 | -0.441 | -0.441 | -0.441 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bu8_A_248 | 1bu8 | A | 248 | 275 | INGIWEGTQNFVACNHLRSYKYYASSIL | HHHHHTTSS----HHHHHHHHHHHHHHH | aaaaaavabxbxaaaaaaaaaaaaaaaa |
1hpl_A_248 | 1hpl | A | 248 | 275 | IDGIWQGTRDFAACNHLRSYKYYTDSIL | HHHHHTTSS----HHHHHHHHHHHHHHH | aaaaaavaxxbxaaaaaaaaaaaaaaaa |
1rp1_*_248 | 1rp1 | - | 248 | 275 | LDGIWEGTRDFVACNHLRSYKYYSESIL | HHHHHTT-S----HHHHHHHHHHHHHHH | aaaaaavabxbxaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bu8_A_248 | 1bu8 | A | NAGN-ACETYL-D-GLUCOSAMINE | S - 272 |
1bu8_A_248 | 1bu8 | A | NAGN-ACETYL-D-GLUCOSAMINE | L - 275 |
Clusters included in this Subclass |
CLUSTER: HH.7.126 |