Information on SUBCLASS 8.5.1 |
Subclass Accession number: 9179
Subclass: 8.5.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 41.3 +/- 24.9 Average RMSD (Å) : 0.333 +/- 0.121 Consensus geometry
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Consensus Sequence: | AXpPppcpFpFX |
(φψ)-conformation: | aababplbpbaa |
Pattern: | [FIPW] | x | [AS] | [ILT] | [EQ] | [P] | [ENQRS] | [EQR] | [GN] | [knqs] | [F] | [DNST] | [F] | [AEGS] | [AGKQS] | [AGS] | [D] | [QRY] | [ILV] | [ALVY] | [AKNS] | [FWY] | [A] | [aekq] | [ADQRS] |
Conservation: | -0.904 | -0.161 | 0.122 | -0.536 | 0.488 | 2.286 | -0.710 | -0.022 | 0.262 | -1.068 | 1.770 | -0.343 | 1.770 | -0.712 | -0.996 | -0.361 | 1.770 | -0.520 | 0.000 | -0.853 | -0.706 | 0.689 | 0.739 | -1.017 | -0.988 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b31_A_52 | 1b31 | A | 52 | 76 | WDATEPNRGQFTFSGSDYLVNFAQS | HHHH-SBTTB---HHHHHHHHHHHH | aaaababpvbxbaaaaaaaaaaaaa |
1exp_*_48 | 1exp | - | 48 | 72 | WDATEPSQNSFSFGAGDRVASYAAD | HHHH-SBTTB---HHHHHHHHHHHH | aaaababpvbxbaaaaaaaaaaaaa |
1hiz_A_64 | 1hiz | A | 64 | 88 | PISIQPEEGKFNFEQADRIVKFAKA | HHHH-SBTTB---HHHHHHHHHHHH | aaaababpvbxbaaaaaaaaaaaaa |
1i1w_A_51 | 1i1w | A | 51 | 75 | WDATEPSQGNFNFAGADYLVNWAQQ | HHHH-SBTTB---HHHHHHHHHHHH | aaaababpvbxbaaaaaaaaaaaaa |
1od8_A_49 | 1od8 | A | 49 | 73 | IDATEPQRGQFNFSSADRVYNWAVQ | HHHH-SBTTB---HHHHHHHHHHHH | aaaababpvbxbaaaaaaaaaaaaa |
1xyz_A_564 | 1xyz | A | 564 | 588 | FDALQPRQNVFDFSKGDQLLAFAER | HHHH-SBTTB---HHHHHHHHHHHH | aaaababxvbbbaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1exp_*_48 | 1exp | * | GLCGLUCOSE | D - 49 |
1i1w_A_51 | 1i1w | A | GOLGLYCEROL | F - 63 |
1i1w_A_51 | 1i1w | A | ACNACETONE | F - 63 |
1i1w_A_51 | 1i1w | A | GOLGLYCEROL | A - 66 |
1i1w_A_51 | 1i1w | A | GOLGLYCEROL | D - 67 |
1i1w_A_51 | 1i1w | A | ACNACETONE | D - 67 |
1i1w_A_51 | 1i1w | A | GOLGLYCEROL | V - 70 |
1i1w_A_51 | 1i1w | A | GOLGLYCEROL | N - 71 |
Clusters included in this Subclass |
CLUSTER: HH.8.4 |