Information on SUBCLASS 8.6.1 |
Subclass Accession number: 9180
Subclass: 8.6.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 28.5 +/- 32.1 Average RMSD (Å) : 0.975 +/- 0.499 Consensus geometry
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Consensus Sequence: | TXhXpXpXhpXX |
(φψ)-conformation: | aalbbaaappaa |
Pattern: | x | [AET] | [DEH] | [FLT] | [AKQ] | [DKS] | [GNRS] | [FK] | [an] | x | [H] | [LV] | x | [ef] | [T] | [KL] | [AGV] | [ik] | [DST] | x | [NY] | [kv] | [ACL] | [DST] | [lpt] | [EMR] | [DV] | [ALY] | [KY] | x | [AI] |
Conservation: | -0.514 | -0.231 | 0.493 | -0.366 | -0.137 | -0.084 | -0.328 | 0.181 | -0.861 | -1.077 | 4.146 | 0.699 | -0.189 | -0.727 | 2.211 | -0.094 | -0.460 | -0.554 | 0.065 | -0.540 | 0.618 | -0.688 | -0.098 | 0.064 | -1.013 | -0.352 | 0.107 | -0.485 | 0.752 | -0.660 | 0.121 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c8k_A_21 | 1c8k | A | 24 | 54 | VTELKKNFNRHLHFTLVKDRNVATPRDYYFA | HHHHHHHHHHHHHHTT---TTT--HHHHHHH | aaaaaaaaaaaaaaaalbbaaaxbaaaaaaa |
1k7w_A_386 | 1k7w | A | 388 | 418 | QAHTASGKAVHLAETKGITINKLSLEDLKSI | HHHHHHHHHHHHHHTTT--GGG--HHHHHHH | aaaaaaaaaaaaaaaavbxaaaxxaaaaaaa |
1l5r_A_24 | 1l5r | A | 24 | 54 | VAELKKSFNRHLHFTLVKDRNVATTRDYYFA | HHHHHHHHHHHHHHTT---TTT--HHHHHHH | aaaaaaaaaaaaaaaalbbaaaxxaaaaaaa |
1ygp_A_24 | 1ygp | A | 24 | 54 | AEDFQDRFIDHVETTLARSLYNCDDMVAYEA | HHHHHHHHHHHHHTTS---GGG--HHHHHHH | aaaaaaaaaaaaaaaalbbaaaxxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.10.32 |
CLUSTER: HH.9.22 |