Information on SUBCLASS 2.2.3 |
Subclass Accession number: 103
Subclass: 2.2.3 Type: HE alpha-beta DB: ArchDB-KI |
Number of loops: 5 Average sequence ID (%) : 26.9 +/- 2.9 Average RMSD (Å) : 0.46 +/- 0.14 Consensus geometry
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Consensus Sequence: | XKhpph |
(φψ)-conformation: | aapabb |
Pattern: | {I} | {EKQ} | {LV} | [FIY] | x | {NQ} | {LT} | [ILV] | x | [DK] | [ACV] | [DK] | [NST] | [AILV] | [IV] | [IW] |
Conservation: | -0.505 | -0.571 | -0.665 | 0.552 | -1.790 | -0.580 | -1.001 | 0.846 | -1.094 | 0.958 | -0.296 | 0.522 | 0.313 | -0.101 | 1.747 | 1.667 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
16pk_*_319 | 16pk | - | 322 | 337 | IEKYVQTIGKCKSAIW | HHHHHHHHTT-SEEEE | aaaaaaaaaababbbb |
1php_*_198 | 1php | - | 202 | 217 | IGVIDNLLEKVDNLII | HHHHHHHTTT-SEEEE | aaaaaaaaaaxabbbb |
1qpg_*_218 | 1qpg | - | 218 | 233 | IQLIDNLLDKVDSIII | HHHHHHHTTT-SEEEE | aaaaaaaaaaxabbbb |
1qpg_*_315 | 1qpg | - | 318 | 333 | RKLFAATVAKAKTIVW | HHHHHHHHTT-SEEEE | aaaaaaaaaaxabbbb |
1vpe_*_298 | 1vpe | - | 301 | 316 | IELFKQKLSDAKTVVW | HHHHHHHHTT-SEEEE | aaaaaaaaaaxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
16pk_*_319 | 16pk | * | BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER | N - 338 |
1php_*_198 | 1php | * | ADPADENOSINE-5'-DIPHOSPHATE | D - 200 |
1php_*_198 | 1php | * | ADPADENOSINE-5'-DIPHOSPHATE | K - 201 |
1qpg_*_315 | 1qpg | * | MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE | N - 334 |
1vpe_*_298 | 1vpe | * | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | N - 317 |
Clusters included in this Subclass |
CLUSTER: HE.5.18 |