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Information on SUBCLASS 2.1.15
Subclass Accession number: 1055
Subclass: 2.1.15 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 13

Average sequence ID (%) : 12.2 +/- 15.3
Average RMSD (Å) : 0.654 +/- 0.176

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XpppXp
(φψ)-conformation: bbabaa
Pattern: x[afilvy][altv][dnstv][degknqrst][dknrst][adgkrt][adenrs][adekrt][ailv]
Conservation:-0.7752.0060.5000.949-0.7320.206-1.1340.454-0.924-0.549
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b6r_A_3141b6r   A319328NLTDSDTSRLEEE-S-HHHHbbbbaxaaaa
1bif_*_2971bif   -298307VFTSQMKRTIEEE-SSHHHHbbbxaxaaaa
1c1d_A_2001c1d   A202211LVADTDTERVEEE-S-HHHHbbbbaxaaaa
1c4q_A_1271c4q   A128137ELATNRANLQEEEE--TTHHxbbbaxaaaa
1e58_A_531e58   A5463AYTSVLKRAIEEE-SSHHHHbbbxabaaaa
1gky_*_1641gky   -165174VIVNDDLDKAEEE-SSHHHHbbxxabaaaa
1h2e_A_511h2e   A5261IYTSTSGRALEEE-SSHHHHbbbxaxaaaa
1id1_A_761id1   A7887LALSDNDADNEE-SS-HHHHbxaxabaaaa
1leh_A_1981leh   A200209VVTDVNKAAVEEE-S-HHHHbbbbabaaaa
1o4u_A_1841o4u   A185194EVEVENLEDAEEEESSHHHHxbxbabaaaa
1odo_A_581odo   A5865..VSKDARAH..EES-HHHH..bbaxaaaa
1uzb_A_4461uzb   A448457GVYSRKREHLEEE-S-HHHHbbbbaxaaaa
1v4v_A_71v4v   A918VLAFGTRPEAEEEE-SHHHHxbbbabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bif_*_2971bif   *     GOLGLYCEROL F - 299
1bif_*_2971bif   *     PO4PHOSPHATE ION M - 303
1bif_*_2971bif   *     PO4PHOSPHATE ION R - 305
1c1d_A_2001c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 204
1c1d_A_2001c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 205
1c1d_A_2001c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 206
1c1d_A_2001c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 207
1c1d_A_2001c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 210
1c4q_A_1271c4q   A     GALD-GALACTOSE A - 130
1c4q_A_1271c4q   A     GALD-GALACTOSE T - 131
1c4q_A_1271c4q   A     GALD-GALACTOSE N - 132
1c4q_A_1271c4q   A     GALD-GALACTOSE R - 133
1e58_A_531e58   A     PHSPHOSPHONO GROUP R - 61
1h2e_A_511h2e   A     PO4PHOSPHATE ION R - 59
1h2e_A_511h2e   A     EDO1,2-ETHANEDIOL R - 59
1odo_A_581odo   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 60
1v4v_A_71v4v   A     MSESELENOMETHIONINE R - 7
1v4v_A_71v4v   A     MSESELENOMETHIONINE V - 9
1v4v_A_71v4v   A     MSESELENOMETHIONINE L - 10
1v4v_A_71v4v   A     MSESELENOMETHIONINE A - 11
1v4v_A_71v4v   A     MSESELENOMETHIONINE F - 12
1v4v_A_71v4v   A     MSESELENOMETHIONINE P - 16
1v4v_A_71v4v   A     MSESELENOMETHIONINE E - 17
1v4v_A_71v4v   A     MSESELENOMETHIONINE A - 18
1v4v_A_71v4v   A     MSESELENOMETHIONINE T - 19
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h2e_A_511h2e   A PO4PO4 BINDING SITE FOR CHAIN AR - 59

Clusters included in this Subclass
CLUSTER: EH.3.35