Information on SUBCLASS 2.4.1 |
Subclass Accession number: 109
Subclass: 2.4.1 Type: HE alpha-beta DB: ArchDB-KI |
Number of loops: 9 Average sequence ID (%) : 18.1 +/- 5.7 Average RMSD (Å) : 0.76 +/- 0.50 Consensus geometry
|
Consensus Sequence: | pXXphX |
(φψ)-conformation: | aalabb |
Pattern: | {GLP} | {ILVY} | [FIVY] | {DEKS} | x | {FMY} | x | [EKQT] | x | {DGN} | x | [FLTVW] | x | x | [AIVW] | x |
Conservation: | -0.379 | -0.033 | 1.310 | 0.533 | 0.012 | 1.267 | -0.694 | 1.504 | -0.920 | 1.504 | -1.254 | -0.317 | -0.579 | -1.681 | 0.377 | -0.650 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ake_A_178 | 1ake | A | 180 | 195 | GYYSKEAEAGNTKYAK | HHHHHHHHTTSSEEEE | aaaaaaaaavabbbbx |
1aky_*_186 | 1aky | - | 186 | 201 | PIVDFYKKTGIWAGVD | HHHHHHHHHT-EEEEE | aaaaaaaaavaxbbbx |
1gky_*_55 | 1gky | - | 56 | 71 | DEFKSMIKNNEFIEWA | HHHHHHHHTT-EEEEE | aaaaaaaaalababbb |
1qf9_A_156 | 1qf9 | A | 158 | 173 | LVIDHYNKFDKVKIIP | HHHHHHHHTT-EEEEE | aaaaaaaaavabbxbx |
1uky_*_168 | 1uky | - | 169 | 184 | PVIEYFETKSKVVRVR | HHHHHHHHTT-EEEEE | aaaaaaaaalabbxbx |
1ukz_*_168 | 1ukz | - | 169 | 184 | PVIEYFETKSKVVRVR | HHHHHHHTTT-EEEEE | aaaaaaaaalabbxbx |
1zip_*_181 | 1zip | - | 181 | 196 | PLVDFYEQKGYLRNIN | HHHHHHHHHT-EEEEE | aaaaaaaaavaxbxbx |
2eck_A_178 | 2eck | A | 180 | 195 | GYYSKEAEAGNTKYAK | HHHHHHHHHTSSEEEE | aaaaaaaaavabbxbb |
3adk_*_158 | 3adk | - | 159 | 174 | PVIAFYEKRGIVRKVN | HHHHHHTTTT-EEEEE | aaaaaaaaavaxbxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gky_*_55 | 1gky | * | 5GPGUANOSINE-5'-MONOPHOSPHATE | E - 69 |
1gky_*_55 | 1gky | * | 5GPGUANOSINE-5'-MONOPHOSPHATE | W - 70 |
1gky_*_55 | 1gky | * | 5GPGUANOSINE-5'-MONOPHOSPHATE | A - 71 |
1gky_*_55 | 1gky | * | 5GPGUANOSINE-5'-MONOPHOSPHATE | F - 73 |
2eck_A_178 | 2eck | A | ADPADENOSINE-5'-DIPHOSPHATE | D - 197 |
Clusters included in this Subclass |
CLUSTER: HE.3.16 |
CLUSTER: HE.3.3 |
CLUSTER: HE.4.22 |