Information on SUBCLASS 4.16.3 |
Subclass Accession number: 1287
Subclass: 4.16.3 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.3 (>50 %) 1.3.1 (>50 %) 1.3.1.26 GO : GO:0008839 (>50 %) GO:0016627 (>50 %) GO:0016628 (>50 %) SCOP : 51734 (>50 %) 51735 (>50 %) 51800 (>50 %) 55346 (>50 %) 55347 (>50 %) 55368 (>50 %) |
Number of loops: 5 Average sequence ID (%) : 10.0 +/- 11.9 Average RMSD (Å) : 1.020 +/- 0.259 Consensus geometry
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Consensus Sequence: | XXXXcpXp |
(φψ)-conformation: | bbapapaa |
Pattern: | x | [AFLV] | x | x | [acdt] | [acgt] | [DGV] | [DNS] | x | x | x | x | x | [aqr] | [AL] | [akn] | [AEKRS] | [agly] |
Conservation: | -0.889 | 0.663 | 0.273 | -0.655 | -0.548 | -0.548 | 1.156 | 2.318 | -0.977 | 0.623 | 0.060 | -1.298 | -0.788 | -0.007 | 1.575 | -0.506 | 0.632 | -1.084 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f74_A_160 | 1f74 | A | 162 | 179 | GVKFTAGDFYLLERLKKA | EEEE--S-HHHHHHHHHH | ebxxapabaaaaaaaaaa |
1gqi_A_32 | 1gqi | A | 32 | 49 | HLHVAGDSPTINAAAAEL | EEEE---SHHHHHHHHHH | bbbbaxNxaaaaaaaaaa |
1jw9_B_124 | 1jw9 | B | 124 | 141 | LVLDCTDNVAVRNQLNAG | EEEE--SSHHHHHHHHHH | bbbxaxabaaaaaaaaaa |
1l1s_A_4 | 1l1s | A | 7 | 24 | VFHIDEDDESRVLLLISN | EEEE----HHHHHHHHHH | bxbbabaxaaaaaaaaaa |
1uc8_A_51 | 1uc8 | A | 51 | 68 | VALERCVSQSRGLAAARY | EEEE--SSHHHHHHHHHH | bbbxaxaxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f74_A_160 | 1f74 | A | NAY6,7,8,9-TETRAHYDROXY-5-METHYLCARBOXAMIDO-2-OXONONANOIC ACID | K - 164 |
1f74_A_160 | 1f74 | A | NAY6,7,8,9-TETRAHYDROXY-5-METHYLCARBOXAMIDO-2-OXONONANOIC ACID | T - 166 |
1gqi_A_32 | 1gqi | A | EDO1,2-ETHANEDIOL | R - 51 |
1jw9_B_124 | 1jw9 | B | ZNZINC ION | N - 139 |
1l1s_A_4 | 1l1s | A | MSESELENOMETHIONINE | D - 11 |
1l1s_A_4 | 1l1s | A | MSESELENOMETHIONINE | E - 12 |
1l1s_A_4 | 1l1s | A | MSESELENOMETHIONINE | D - 13 |
1l1s_A_4 | 1l1s | A | MSESELENOMETHIONINE | N - 24 |
1l1s_A_4 | 1l1s | A | MSESELENOMETHIONINE | V - 25 |
1l1s_A_4 | 1l1s | A | MSESELENOMETHIONINE | R - 26 |
1l1s_A_4 | 1l1s | A | MSESELENOMETHIONINE | N - 27 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gqi_A_32 | 1gqi | A | AC3EDO BINDING SITE FOR CHAIN A | R - 51 |
Clusters included in this Subclass |
CLUSTER: EH.3.113 |
CLUSTER: EH.5.117 |