Information on SUBCLASS 8.8.1 |
Subclass Accession number: 1991
Subclass: 8.8.1 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.10 (>50 %) 1.10.3 (>50 %) GO : GO:0005507 (>75 %) GO:0005529 (>75 %) GO:0005529 (>75 %) GO:0016679 (>50 %) GO:0016682 (>50 %) GO:0030246 (>75 %) GO:0030246 (>75 %) SCOP : 49502 (>75 %) 49503 (>75 %) 49550 (>75 %) 49898 (>75 %) 49899 (>75 %) 49932 (>75 %) 50352 (>75 %) 50370 (>75 %) 50371 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 32.5 +/- 20.8 Average RMSD (Å) : 0.650 +/- 0.238 Consensus geometry
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Consensus Sequence: | pppXhPFppGpX |
(φψ)-conformation: | bbapbabbplbp |
Pattern: | x | [ER] | [EQS] | [AKS] | x | [FM] | [P] | [F] | [EQT] | [DKPS] | [G] | [DKQS] | x | [AF] | [EKQ] | [ILTV] | [CQST] | [IV] | x | [FV] |
Conservation: | -0.549 | 0.223 | -0.309 | -0.485 | -1.076 | 0.476 | 2.390 | 1.864 | -0.291 | -0.830 | 1.864 | -0.633 | -1.159 | 0.001 | 0.121 | -0.469 | -0.863 | 0.587 | -0.602 | -0.260 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a3k_*_185 | 1a3k | - | 185 | 204 | ERQSVFPFESGKPFKIQVLV | EEE------TT-EEEEEEEE | bbbaxbaxbpvbxbbbbbbx |
1g86_A_76 | 1g86 | A | 76 | 95 | VESKNMPFQDGQEFELSISV | EEE------TT--EEEEEEE | bbbaxbaxxpvbxbbbbbbx |
1gzw_A_72 | 1gzw | A | 72 | 91 | QREAVFPFQPGSVAEVCITF | EE-S-----TTSEEEEEEEE | bbxabbabbpvbxbbbbbbx |
1is3_A_73 | 1is3 | A | 73 | 92 | ERSKKFPFTKGDHFQTTITF | EEE------TTSEEEEEEEE | bbbaxbabbpvbxbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a3k_*_185 | 1a3k | * | NAGN-ACETYL-D-GLUCOSAMINE | R - 186 |
1g86_A_76 | 1g86 | A | NEQN-ETHYLMALEIMIDE | D - 85 |
1g86_A_76 | 1g86 | A | NEQN-ETHYLMALEIMIDE | G - 86 |
1g86_A_76 | 1g86 | A | NEQN-ETHYLMALEIMIDE | Q - 87 |
1gzw_A_72 | 1gzw | A | BGCBETA-D-GLUCOSE | R - 73 |
1gzw_A_72 | 1gzw | A | SEO2-MERCAPTOETHANOL | E - 86 |
1gzw_A_72 | 1gzw | A | CSOS-HYDROXYCYSTEINE | V - 87 |
1gzw_A_72 | 1gzw | A | SEO2-MERCAPTOETHANOL | V - 87 |
1gzw_A_72 | 1gzw | A | CSOS-HYDROXYCYSTEINE | C - 88 |
1gzw_A_72 | 1gzw | A | SEO2-MERCAPTOETHANOL | C - 88 |
1gzw_A_72 | 1gzw | A | CSOS-HYDROXYCYSTEINE | I - 89 |
1gzw_A_72 | 1gzw | A | CSOS-HYDROXYCYSTEINE | T - 90 |
1gzw_A_72 | 1gzw | A | CSOS-HYDROXYCYSTEINE | F - 91 |
1is3_A_73 | 1is3 | A | LATLACTOSE | R - 74 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gzw_A_72 | 1gzw | A | SA1SEO BINDING SITE FOR CHAIN A | E - 86 |
1gzw_A_72 | 1gzw | A | SA1SEO BINDING SITE FOR CHAIN A | C - 88 |
Clusters included in this Subclass |
CLUSTER: AR.9.15 |