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Information on SUBCLASS 2.5.7
Subclass Accession number: 2248
Subclass: 2.5.7 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.2 (>75 %)  1.2.1 (>75 %)  1.2.1.2
GO : GO:0008863 (>75 %)  GO:0016620 (>75 %)  GO:0016903 (>75 %)  GO:0030151 (>75 %)  GO:0046914 (>75 %)  
SCOP : 53705 (>75 %)  53706 (>75 %)  53707 (>75 %)  
 Number of loops: 2

Average sequence ID (%) : 27.3 +/- 0.0
Average RMSD (Å) : 0.300 +/- 0.000

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: hTQXpX
(φψ)-conformation: aapbaa
Pattern: [LM][G][VW][T][Q][FH][TY]x[G][AV][EQ][NT][IV][R][ST][LM][AT]x[IL][AQ][LM][L]
Conservation:-0.0331.979-0.7651.2481.248-0.216-0.948-1.4971.979-0.9480.150-0.3990.1501.248-0.399-0.033-0.765-1.131-0.216-1.131-0.0330.516
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aa6_*_2971aa6   -297318MGVTQFYQGVETVRSLTSLAMLHHHHSSTTHHHHHHHHHHHHHHaaaaxbaaaaaaaaaaaaaaaa
1kqf_A_4101kqf   A410431LGWTQHTVGAQNIRTMAMIQLLHHHHSSTTHHHHHHHHHHHHHHaaaaxbaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aa6_*_2971aa6   *     CSESELENOCYSTEINE M - 297
1aa6_*_2971aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE M - 297
1aa6_*_2971aa6   *     4MOMOLYBDENUM(IV) ION M - 297
1aa6_*_2971aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE G - 298
1aa6_*_2971aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE V - 299
1aa6_*_2971aa6   *     CSESELENOCYSTEINE T - 300
1aa6_*_2971aa6   *     CSESELENOCYSTEINE Q - 301
1aa6_*_2971aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE Q - 301
1aa6_*_2971aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE F - 302
1kqf_A_4101kqf   A     CSESELENOCYSTEINE L - 410
1kqf_A_4101kqf   A     6MOMOLYBDENUM(VI) ION L - 410
1kqf_A_4101kqf   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE L - 410
1kqf_A_4101kqf   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE G - 411
1kqf_A_4101kqf   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE W - 412
1kqf_A_4101kqf   A     CSESELENOCYSTEINE T - 413
1kqf_A_4101kqf   A     CSESELENOCYSTEINE Q - 414
1kqf_A_4101kqf   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE Q - 414
1kqf_A_4101kqf   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE H - 415
1kqf_A_4101kqf   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE N - 421

Clusters included in this Subclass
CLUSTER: HH.3.208