Information on SUBCLASS 3.6.1 |
Subclass Accession number: 2327
Subclass: 3.6.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 9.8 +/- 11.0 Average RMSD (Å) : 0.836 +/- 0.242 Consensus geometry
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Consensus Sequence: | XXXXpXX |
(φψ)-conformation: | aapabaa |
Pattern: | x | [cfgiklv] | [agikl] | [afklv] | [almvwy] | [adenqrs] | x | x | [ekpqt] | [cdenst] | [degkqs] | [cenqw] | [cdekst] | [akrs] | x | x | x | x | [ehknrt] |
Conservation: | -1.741 | -0.783 | 0.661 | -0.161 | 0.141 | 0.348 | -0.593 | -0.338 | 0.065 | 1.777 | 0.345 | 2.228 | 0.285 | 0.868 | -1.461 | -0.951 | -1.036 | 0.040 | 0.304 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a6j_A_134 | 1a6j | A | 136 | 154 | ICRRLRAAQSDEELYQIIT | HHHHHHH--SHHHHHHHHH | aaaaaaapabaaaaaaaaa |
1f7c_A_275 | 1f7c | A | 280 | 298 | SFIKAAKLENQESRVSEIH | HHHHHHT-SSHHHHHHHHH | aaaaaaapaxaaaaaaaaa |
1hn0_A_450 | 1hn0 | A | 453 | 471 | HLALLLLEPDDQKRINLVN | HHHHHHT-SSHHHHHHHHH | aaaaaaapaxaaaaaaaaa |
1jr8_A_35 | 1jr8 | A | 45 | 63 | IGLYAELYPCGECSYHFVK | HHHHHHH-SSHHHHHHHHH | aaaaaaapabaaaaaaaaa |
1js8_A_2646 | 1js8 | A | 2650 | 2668 | QIALALEQTDFCDFEIQFE | HHHHHHH--SHHHHHHHHH | aaaaaaaxabaaaaaaaaa |
1k32_A_682 | 1k32 | A | 694 | 712 | WKLARDNYWNEAVAKEISE | HHHHHHH-S-HHHHHHHHH | aaaaaaapabaaaaaaaaa |
1m0u_A_128 | 1m0u | A | 147 | 165 | KIAVVSYEPEDEIKEKKLV | HHHHHHT-SSHHHHHHHHH | aaaaaaapaxaaaaaaaaa |
1mty_B_225 | 1mty | B | 231 | 249 | VEGLWQEVFDWNESAFSVH | HHHHHHT---HHHHHHHHH | aaaaaaabaxaaaaaaaaa |
1mty_G_87 | 1mty | G | 94 | 112 | TVAKMNAAKDKWEAEKIHI | HHHHHHH--SHHHHHHHHH | aaaaaaapabaaaaaaaaa |
1omw_A_80 | 1omw | A | 88 | 106 | EIKKYEKLETEEERLVCSR | HHHHHHT--SHHHHHHHHH | aaaaaaaxabaaaaaaaaa |
1qsa_A_572 | 1qsa | A | 572 | 590 | AVAFVESIPFSETRGYVKN | HHHHHHH-S-HHHHHHHHH | aaaaaaapaxaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 48 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 52 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | C - 54 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 56 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | C - 57 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | S - 58 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | H - 60 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 61 |
1js8_A_2646 | 1js8 | A | CUOCU2-O2 CLUSTER | H - 2671 |
1js8_A_2646 | 1js8 | A | CUOCU2-O2 CLUSTER | N - 2672 |
1js8_A_2646 | 1js8 | A | CUOCU2-O2 CLUSTER | H - 2675 |
1m0u_A_128 | 1m0u | A | GTTGLUTATHIONE | N - 142 |
1m0u_A_128 | 1m0u | A | GTTGLUTATHIONE | R - 145 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | A - 572 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | V - 573 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | A - 574 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | Y - 587 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | Y - 594 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | D - 595 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | A - 596 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | R - 599 |
Clusters included in this Subclass |
CLUSTER: HH.2.159 |
CLUSTER: HH.3.58 |
CLUSTER: HH.4.58 |