Logo
Information on SUBCLASS 4.18.2
Subclass Accession number: 2407
Subclass: 4.18.2 PSSM
Type: HH alpha-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.4 (>75 %)  3.4.24 (>75 %)  
GO : GO:0004175 (>75 %)  GO:0004222 (>75 %)  GO:0005509 (>75 %)  GO:0008233 (>75 %)  GO:0008237 (>75 %)  GO:0008270 (>75 %)  GO:0046914 (>75 %)  
SCOP : 55485 (>75 %)  55486 (>75 %)  55490 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 8.8 +/- 9.4
Average RMSD (Å) : 1.033 +/- 0.252

Consensus geometry
d (Å): 15 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: pXXXhXXp
(φψ)-conformation: aapbbpaa
Pattern: [AGK][EQY]xx[KQY]x[AT][AGK][LV][PT][PS][HRS]x[IMV]xx[AFL]x[NQ]
Conservation:-0.4980.210-0.615-0.615-0.026-1.0871.244-0.4981.2721.8150.673-0.026-0.7331.154-0.733-0.615-0.615-1.7951.490
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1csh_*_1041csh   -112130KEWAKRAALPSHVVTMLDNHHHHHH----HHHHHHHHHaaaaaaxbbxaaaaaaaaa
1cv8_*_571cv8   -5775GQQFQFTGLTPREMIYFGQHHHHHH----HHHHHHHHHeaaaaaxxbxaaaaaaaaa
1mky_A_3511mky   A352370AYASYTTKVPSSAINSALQHHHHHT----HHHHHHHHHaaaaaaxbbxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE F - 62
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE T - 63
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE G - 64
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE L - 65
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE T - 66
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE P - 67
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE E - 69
1cv8_*_571cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE M - 70
1mky_A_3511mky   A     MSESELENOMETHIONINE L - 351
1mky_A_3511mky   A     MSESELENOMETHIONINE A - 352
1mky_A_3511mky   A     MSESELENOMETHIONINE Y - 353
1mky_A_3511mky   A     MSESELENOMETHIONINE A - 354
1mky_A_3511mky   A     MSESELENOMETHIONINE S - 362
1mky_A_3511mky   A     MSESELENOMETHIONINE S - 363
1mky_A_3511mky   A     MSESELENOMETHIONINE N - 366
1mky_A_3511mky   A     PO4PHOSPHATE ION K - 371

Clusters included in this Subclass
CLUSTER: HH.5.209