Information on SUBCLASS 3.8.3 |
Subclass Accession number: 241
Subclass: 3.8.3 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>75 %) |
Number of loops: 2 Average sequence ID (%) : 13.0 +/- 0.0 Average RMSD (Å) : 1.200 +/- 0.000 Consensus geometry
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Consensus Sequence: | pXppphX |
(φψ)-conformation: | aapapbp |
Pattern: | [ER] | [AE] | [AE] | [IL] | [EQ] | [R] | [LT] | [FV] | [DS] | [AQ] | [L] | [LV] | [DN] | [AY] | [R] | [ES] | [GS] | [HQ] | [EQ] | [ER] | [FP] | x | x |
Conservation: | -0.121 | -0.784 | -0.784 | 0.322 | 0.764 | 2.091 | -0.784 | -0.563 | -0.121 | -0.784 | 1.206 | -0.121 | 0.764 | -0.784 | 2.091 | -0.342 | -0.121 | 0.543 | 0.764 | -0.121 | -1.226 | -1.890 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gs5_A_17 | 1gs5 | A | 17 | 39 | EEALERLFSALVNYRESHQRPLV | HHHHHHHHHHHHHHHTT--S-EE | aaaaaaaaaaaaaaaaabaxxxb |
1q5d_A_123 | 1q5d | A | 123 | 144 | RAEIQRTVDQLLDARSGQEEFD. | HHHHHHHHHHHHHHHTTSS-EE. | aaaaaaaaaaaaaaaaaxabbx. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gs5_A_17 | 1gs5 | A | NLGN-ACETYL-L-GLUTAMATE | H - 42 |
1gs5_A_17 | 1gs5 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | H - 42 |
Clusters included in this Subclass |
CLUSTER: HE.6.64 |