ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 7.4.1

Subclass Accession number: 2518
Subclass: 7.4.1

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.1 (>75 %)  3.1.3 (>75 %)  3.1.3.48
GO : GO:0005083 (>50 %)  GO:0005085 (>50 %)  GO:0005506 (>75 %)  GO:0016788 (>75 %)  GO:0016791 (>75 %)  GO:0030695 (>50 %)  GO:0042578 (>75 %)  GO:0046914 (>75 %)
SCOP : 47239 (>75 %)  47240 (>75 %)  47241 (>75 %)  52798 (>75 %)  52799 (>75 %)  52805 (>75 %)

Number of loops: 3

Average sequence ID (%) : 14.8 +/- 14.3
Average RMSD (Å) : 0.933 +/- 0.153

Consensus geometry

d (Å): 13

delta (°): 45-90

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	XppXhXXXpXp
(φψ)-conformation:	aabwaaappaa

Pattern:	[DPV]	[AN]	x	[ALM]	x	x	[ILW]	x	[KR]	[KT]	[PR]	[ALP]	[DGS]	x	x	[ST]	x	[DR]	[DSV]	x	[DER]	x	[FI]	x	[DEQ]	[EL]	[FLV]
Conservation:	-1.079	0.661	-0.952	-0.066	-1.079	-0.699	-0.066	-1.585	2.448	0.853	1.391	-1.079	0.060	-0.143	-0.243	1.423	-0.699	0.896	-1.205	0.187	0.313	-0.335	1.062	-1.205	1.326	-0.243	0.060

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1iap_A_116	1iap	A	116	142	PNVAFELDRTRADLISEDVQRRFVQEV	HHHHHHHTT--TTT--HHHHHHHHHHH	aaaaaaaaabxaaapxaaaaaaaaaaa
1ji6_A_124	1ji6	A	145	171	VNALNSWKKTPLSLRSKRSQDRIRELF	HHHHHHHHHS-GGG--HHHHHHHHHHH	aaaaaaaaaxwaaaxbaaaaaaaaaaa
1o7f_A_295	1o7f	A	307	333	DAHMRMILRKPPGQRTVDDLEIIYDEL	HHHHHHHTTS-TTS--HHHHHHHHHHH	aaaaaaaaabwaaabxaaaaaaaaaaa

Clusters included in this Subclass