ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 14.3.1

Subclass Accession number: 2548
Subclass: 14.3.1

Type: HH alpha-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.7 (>75 %)  1.7.2 (>75 %)  1.7.2.2 (>75 %)  2.5 (>75 %)  2.5.1 (>75 %)  2.5.1.18
GO : GO:0004364 (>75 %)  GO:0005509 (>75 %)  GO:0016661 (>75 %)  GO:0016662 (>75 %)  GO:0016765 (>75 %)  GO:0042279 (>75 %)
SCOP : 47615 (>75 %)  47616 (>75 %)  47617 (>75 %)  48694 (>75 %)  48695 (>75 %)  48711 (>75 %)  51350 (>75 %)  51395 (>75 %)  51396 (>75 %)

Number of loops: 3

Average sequence ID (%) : 48.7 +/- 6.6
Average RMSD (Å) : 0.333 +/- 0.058

Consensus geometry

d (Å): 11

delta (°): 0-45

theta (°): 135-180

rho (°): 90-135

Consensus Sequence:	FLpXXXNpRpDphGGphX
(φψ)-conformation:	aapaaabapapaabepaa

Pattern:	[L]	[IL]	[DN]	[EQ]	[F]	[L]	[DKT]	x	x	x	[N]	[DQT]	[R]	[ST]	[D]	[EQ]	[WY]	[G]	[G]	[DS]	[IY]	[AER]	[N]	[R]	[ACM]	[R]	[F]	[ALT]	[KLV]	[EQ]	[V]	[V]	[DER]	[AG]	[LV]	x	[ES]	[AR]	[IV]
Conservation:	0.396	-0.118	0.190	0.153	1.480	0.396	-1.170	-1.712	-1.110	-1.230	1.480	-1.050	0.938	-0.199	1.480	0.167	1.074	1.480	1.480	-0.471	-0.643	-1.170	1.480	0.938	-0.929	0.938	1.480	-1.230	-1.351	0.164	0.396	0.396	-0.809	-0.471	-0.375	-1.347	-0.435	-0.823	0.134

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1oyb_*_197	1oyb	-	197	235	LLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAI	HHHHHH-TTT----STTSSSHHHHHHHHHHHHHHHHHHH	aaaaaaxaaabaxaxaabvbaaaaaaaaaaaaaaaaaaa
1ps9_A_167	1ps9	A	167	205	LINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERV	HHHHHH-TTT----STTSSSHHHHHHHHHHHHHHHHHHH	aaaaaaxaaabaxaxaabexaaaaaaaaaaaaaaaaaaa
1q45_A_192	1q45	A	192	230	LIDQFLKDGINDRTDQYGGSIANRCRFLKQVVEGVVSAI	HHHHHH-TTT----STTSSSHHHHHHHHHHHHHHHHHHH	aaaaaaxaaaxaxaxaabexaaaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ps9_A_167	1ps9	A	MDE5-MERCAPTOETHANOL-2-DECENOYL-COENZYME A	R - 175

Clusters included in this Subclass