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Information on SUBCLASS 5.36.1
Subclass Accession number: 4040
Subclass: 5.36.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 51.0 +/- 18.8
Average RMSD (Å) : 0.275 +/- 0.050

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: ppFGGRXpF
(φψ)-conformation: bpapababb
Pattern: [KQRS][NQS][F][G][GQ][R][AS][AQRS][F][AGW][G][EPQR][IV]x[T][LV][KR]
Conservation:-0.837-0.5861.3361.336-0.4840.846-0.377-1.1131.336-1.0821.336-0.9910.134-1.5720.846-0.3120.185
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1j3l_A_231j3l   A2339KSFGGRARFAGRVRTLREE-SSBSSEEEEEEEEExxaxababbbexxbbbb
1nxj_A_271nxj   A2743RQFGGRSQFAGPISTVREE-SSBS-EEEEEEEEEbxaxababbbexxbbbb
1q5x_A_241q5x   A2440SNFGGRASFGGQIITVKEE-SS-SSEEEEEEEEEbxaxababbbexbbxbb
1vi4_A_251vi4   A2541QNFGQRSAFWGEIVTVREE-SS-S-EEEEEEEEEbxaxaxabbbexxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j3l_A_231j3l   A     MSESELENOMETHIONINE K - 23
1j3l_A_231j3l   A     MSESELENOMETHIONINE S - 24
1nxj_A_271nxj   A     GLVGLYOXYLIC ACID R - 27
1nxj_A_271nxj   A     GLVGLYOXYLIC ACID Q - 28
1vi4_A_251vi4   A     MSESELENOMETHIONINE F - 27
1vi4_A_251vi4   A     MSESELENOMETHIONINE G - 28
1vi4_A_251vi4   A     MSESELENOMETHIONINE Q - 29
1vi4_A_251vi4   A     MSESELENOMETHIONINE R - 30
1vi4_A_251vi4   A     MSESELENOMETHIONINE S - 31
1vi4_A_251vi4   A     MSESELENOMETHIONINE A - 32
1vi4_A_251vi4   A     MSESELENOMETHIONINE F - 33
1vi4_A_251vi4   A     MSESELENOMETHIONINE W - 34
1vi4_A_251vi4   A     MSESELENOMETHIONINE I - 37

Clusters included in this Subclass
CLUSTER: AR.5.162