Logo
Information on SUBCLASS 1.2.1
Subclass Accession number: 463
Subclass: 1.2.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 10.8 +/- 13.2
Average RMSD (Å) : 0.233 +/- 0.082

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XhXXX
(φψ)-conformation: bbabb
Pattern: [avy][ALV]x[gwy][dkps][dktwy][ailt][mvwy]
Conservation:-0.0562.014-0.4630.569-0.606-1.397-0.2300.169
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h0b_A_1501h0b   A156163YADWDWNYEEESSSEEbbxbabxb
1jmx_B_1611jmx   B162169YVAGPDIYEEESSSEExbxbabxb
1n97_A_3671n97   A367374VLAQVTLREEESSSEExxxbabxb
1nuy_A_11611nuy   A11651172ALYGSATMEEESSSEEbbxbabxb
1oey_A_3531oey   A355362KVHYKYTVEEESSSEEbbxbabbb
1q15_A_1281q15   A129136VVQGKKAWEEESSSEEbbbbabxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h0b_A_1501h0b   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID W - 159
1h0b_A_1501h0b   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID W - 161
1h0b_A_1501h0b   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID Y - 163
1n97_A_3671n97   A     EGLETHYLENE GLYCOL Q - 370
1n97_A_3671n97   A     EGLETHYLENE GLYCOL V - 371
1n97_A_3671n97   A     EGLETHYLENE GLYCOL T - 372
1oey_A_3531oey   A     MSESELENOMETHIONINE T - 353
1oey_A_3531oey   A     MSESELENOMETHIONINE L - 354
1oey_A_3531oey   A     MSESELENOMETHIONINE K - 355
1oey_A_3531oey   A     MSESELENOMETHIONINE V - 356
1oey_A_3531oey   A     MSESELENOMETHIONINE H - 357
1oey_A_3531oey   A     MSESELENOMETHIONINE V - 362
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h0b_A_1501h0b   A HE1EPE BINDING SITE FOR CHAIN AW - 161

Clusters included in this Subclass
CLUSTER: HA.4.30