Information on SUBCLASS 1.2.1 |
Subclass Accession number: 463
Subclass: 1.2.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 10.8 +/- 13.2 Average RMSD (Å) : 0.233 +/- 0.082 Consensus geometry
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Consensus Sequence: | XhXXX |
(φψ)-conformation: | bbabb |
Pattern: | [avy] | [ALV] | x | [gwy] | [dkps] | [dktwy] | [ailt] | [mvwy] |
Conservation: | -0.056 | 2.014 | -0.463 | 0.569 | -0.606 | -1.397 | -0.230 | 0.169 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h0b_A_150 | 1h0b | A | 156 | 163 | YADWDWNY | EEESSSEE | bbxbabxb |
1jmx_B_161 | 1jmx | B | 162 | 169 | YVAGPDIY | EEESSSEE | xbxbabxb |
1n97_A_367 | 1n97 | A | 367 | 374 | VLAQVTLR | EEESSSEE | xxxbabxb |
1nuy_A_1161 | 1nuy | A | 1165 | 1172 | ALYGSATM | EEESSSEE | bbxbabxb |
1oey_A_353 | 1oey | A | 355 | 362 | KVHYKYTV | EEESSSEE | bbxbabbb |
1q15_A_128 | 1q15 | A | 129 | 136 | VVQGKKAW | EEESSSEE | bbbbabxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h0b_A_150 | 1h0b | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | W - 159 |
1h0b_A_150 | 1h0b | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | W - 161 |
1h0b_A_150 | 1h0b | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | Y - 163 |
1n97_A_367 | 1n97 | A | EGLETHYLENE GLYCOL | Q - 370 |
1n97_A_367 | 1n97 | A | EGLETHYLENE GLYCOL | V - 371 |
1n97_A_367 | 1n97 | A | EGLETHYLENE GLYCOL | T - 372 |
1oey_A_353 | 1oey | A | MSESELENOMETHIONINE | T - 353 |
1oey_A_353 | 1oey | A | MSESELENOMETHIONINE | L - 354 |
1oey_A_353 | 1oey | A | MSESELENOMETHIONINE | K - 355 |
1oey_A_353 | 1oey | A | MSESELENOMETHIONINE | V - 356 |
1oey_A_353 | 1oey | A | MSESELENOMETHIONINE | H - 357 |
1oey_A_353 | 1oey | A | MSESELENOMETHIONINE | V - 362 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h0b_A_150 | 1h0b | A | HE1EPE BINDING SITE FOR CHAIN A | W - 161 |
Clusters included in this Subclass |
CLUSTER: HA.4.30 |