Information on SUBCLASS 2.13.1 |
Subclass Accession number: 4642
Subclass: 2.13.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 35.9 +/- 31.9 Average RMSD (Å) : 0.667 +/- 0.289 Consensus geometry
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Consensus Sequence: | XpXXhX |
(φψ)-conformation: | aaFbaa |
Pattern: | [GT] | x | [LV] | [GS] | x | [ET] | [CIT] | [DP] | [AG] | [AE] | [KQT] | [TV] | x | x | [AW] | [AQS] | [AK] | [M] | x | [I] | [G] | [MR] | [CS] | x | x | [AS] |
Conservation: | -0.316 | -0.937 | 0.296 | 0.243 | -1.049 | -0.093 | -0.633 | 0.475 | 0.359 | -0.320 | -0.545 | 0.131 | -0.544 | -0.656 | 0.318 | -0.545 | -0.320 | 2.267 | -1.049 | 1.476 | 3.058 | -0.093 | 0.359 | -1.072 | -1.107 | 0.296 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a49_A_293 | 1a49 | A | 294 | 319 | GDLGIEIPAEKVFLAQKMIIGRCNRA | HHHHHHS-GGGHHHHHHHHHHHHHHH | aaaaaabxaaaaaaaaaaaaaaaaaa |
1e6y_A_1226 | 1e6y | A | 1226 | 1251 | TIVSRTTDGAQTSRWAAMQIGMSFIS | HHHHHHS-TTHHHHHHHHHHHHHHHH | aaaaaaFbaaaaaaaaaaaaaaaaaa |
1hbn_A_212 | 1hbn | A | 212 | 237 | TIVSRTCDGATTSRWSAMQIGMSMIS | HHHHHHS-TTHHHHHHHHHHHHHHHH | aaaaaaFbaaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e6y_A_1226 | 1e6y | A | AC2F43 BINDING SITE FOR CHAIN A | Q - 1244 |
1hbn_A_212 | 1hbn | A | AC4TP7 BINDING SITE FOR CHAIN D | R - 225 |
1hbn_A_212 | 1hbn | A | AC1F43 BINDING SITE FOR CHAIN D | Q - 230 |
1hbn_A_212 | 1hbn | A | AC1F43 BINDING SITE FOR CHAIN D | M - 233 |
Clusters included in this Subclass |
CLUSTER: HH.4.195 |