Information on SUBCLASS 4.52.1 |
Subclass Accession number: 4863
Subclass: 4.52.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.1 (>75 %) 3.1.4 (>75 %) 3.1.4.17 GO : GO:0008081 (>75 %) GO:0016788 (>75 %) GO:0042578 (>75 %) SCOP : 48546 (>75 %) 48547 (>75 %) 48548 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 68.2 +/- -17.8 Average RMSD (Å) : 0.133 +/- 0.058 Consensus geometry
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Consensus Sequence: | hYNDpSVL |
(φψ)-conformation: | aalUblaa |
Pattern: | [EP] | x | [A] | [LV] | [LM] | [Y] | [N] | [D] | [ERS] | [S] | [V] | [L] | [E] | [N] | [H] | [H] | [AL] | [A] | [SV] | [AG] | [FW] | [KN] |
Conservation: | -0.749 | -1.337 | -0.028 | -0.739 | -0.378 | 1.396 | 0.922 | 0.922 | -1.293 | -0.028 | -0.028 | -0.028 | 0.447 | 0.922 | 1.871 | 1.871 | -1.213 | -0.028 | -1.451 | -0.728 | 0.302 | -0.626 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f0j_A_292 | 1f0j | A | 292 | 313 | ELALMYNDESVLENHHLAVGFK | HHHHHTTTSSHHHHHHHHHHHH | aaaaaalUblaaaaaaaaaaaa |
1oyn_A_218 | 1oyn | A | 218 | 239 | ELALMYNDSSVLENHHLAVGFK | HHHHHTTTSSHHHHHHHHHHHH | aaaaaalUblaaaaaaaaaaaa |
1so2_A_839 | 1so2 | A | 839 | 860 | PQAVLYNDRSVLENHHAASAWN | HHHHHTTTSSHHHHHHHHHHHH | aaaaaalvblaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f0j_A_292 | 1f0j | A | MGMAGNESIUM ION | E - 304 |
1f0j_A_292 | 1f0j | A | MGMAGNESIUM ION | H - 307 |
1oyn_A_218 | 1oyn | A | ZNZINC ION | L - 229 |
1oyn_A_218 | 1oyn | A | ZNZINC ION | E - 230 |
1oyn_A_218 | 1oyn | A | ZNZINC ION | H - 233 |
1so2_A_839 | 1so2 | A | MGMAGNESIUM ION | L - 850 |
1so2_A_839 | 1so2 | A | MGMAGNESIUM ION | E - 851 |
1so2_A_839 | 1so2 | A | MGMAGNESIUM ION | H - 854 |
Clusters included in this Subclass |
CLUSTER: HH.4.273 |